Gene Pcal_2064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_2064 
Symbol 
ID4909517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1916209 
End bp1917624 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content53% 
IMG OID640125817 
Productmetal dependent phosphohydrolase 
Protein accessionYP_001056945 
Protein GI126460667 
COG category[R] General function prediction only 
COG ID[COG1078] HD superfamily phosphohydrolases 
TIGRFAM ID[TIGR01353] deoxyguanosinetriphosphate triphosphohydrolase, putative 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTGTACA AGAAAGCGAT TAGAGACCCA ATCCACGGCT TCATTAAGCT CACTGAGGAG 
GAGGTCAAGT TTATAGACGG CGAGCCTCTT GTCCAGAGGC TGAGGTATGT GAAACAACTG
GGCTTCGTCT ATCTTGTATA TCCAACGGCC ACGCATACGA GGTTTGACCA CAGCTTAGGC
GTGATGTACA TCGCCACGTT GCTTGGGGAG AAGATAATGC AGTTGATGGG CGAGAAAGAC
GAGGGCTTGC TTCAGCACCT CCGCATAGCC GCCTTGTTGC ACGACCTGGG GCACCTGCCG
TTTTCCCACT CCTTCGAGGC CGTGGTCAGC GAAGTTCTCC ACATGGCCAA GAAGGGTGGG
TGCGTCGATG TGGACCTTTC CATGTTTGAC GTGGGGAAGC CCCACGAGGT CACGACTAGG
CTTCTAGTGG ATAAAGTTTC GCCAAGGCTC TCTGAGCTGG GCTACGACCC AGACCTCGTC
AAGGCTTTGC TGTTTGACGG AGAGAAGTAT AAGCCGTTTC ACAGCATACT CTCGGGGGTA
TTTGACGCAG ACCGGCTGGA CTACATAATG CGAGATATGT ATTTCACGGG GGCGGCTGTG
GGCACCAGTT TTACACACAT AGACCTCGAG CGAGTTGTGG AAAATCTCGA GGAGGCGGGG
GACAGATTTC TGTTTAACGA GAAGGCGAGA GTTAATTTGG AGGGCTACTT AATCACGCGC
TATAACTTGT ATCGGCACGT CTACCTCCAC CACAAGACGG TCCTTTTTAC AGAAGTCGCG
AGGAGCATAA TAGCTGAGAA TGTGGAAAAA TGTGCGGAGG GGCGCGGGGG TGAGATTTGT
CAATATCTCT GCGACCTCGC GAGATTTATA TCAGGCGACG TAGATGAAGA GGTGGTTTGG
AAGGCCACAG ACGAGTACTT CGTCTCAGTC TTTGTCAAAG ACCCAAAGTT TAGGGAGCTA
CTTTCACGCA AGCAGCTCGA CTACGTGGCT CTTTGGAAGC GTGAAAAAGA CTTCTTGGAG
GTGTTTAAGG ACCCCGTTAG GCTTAACGAG GCTGTGGATA GGCTTGGCCC GCCGCACTGG
GCCTTGATAG ACAAGTTGAA GAAGAAGCTC GTGGAGCGGC TCAACGTCGA GCTCGGCGAT
TCCAACTGCA GACTTGAGCC CAGCGACGTG TTGATATCTT ACGTGAGCTT TGACCCCAGG
GCAGAGGACT TGTATATAAC GACGGCGCGG GGGCCTGTGC CAATATACGA AATTTCTCCA
CTGGTGGCCG CAGTCAACGA GGCGTGGAGG AGGGCCCCCC ACCTCTTTGT GCACGTTAGG
AGGGGGGTTT TGGACAAGTG CAAAAACGCC CTCGATATTT TAAAAGCGTC GTTAGAGCCG
CTTCTCGAGC TGACTATTAG GAGAATCTCA TCCTAG
 
Protein sequence
MLYKKAIRDP IHGFIKLTEE EVKFIDGEPL VQRLRYVKQL GFVYLVYPTA THTRFDHSLG 
VMYIATLLGE KIMQLMGEKD EGLLQHLRIA ALLHDLGHLP FSHSFEAVVS EVLHMAKKGG
CVDVDLSMFD VGKPHEVTTR LLVDKVSPRL SELGYDPDLV KALLFDGEKY KPFHSILSGV
FDADRLDYIM RDMYFTGAAV GTSFTHIDLE RVVENLEEAG DRFLFNEKAR VNLEGYLITR
YNLYRHVYLH HKTVLFTEVA RSIIAENVEK CAEGRGGEIC QYLCDLARFI SGDVDEEVVW
KATDEYFVSV FVKDPKFREL LSRKQLDYVA LWKREKDFLE VFKDPVRLNE AVDRLGPPHW
ALIDKLKKKL VERLNVELGD SNCRLEPSDV LISYVSFDPR AEDLYITTAR GPVPIYEISP
LVAAVNEAWR RAPHLFVHVR RGVLDKCKNA LDILKASLEP LLELTIRRIS S