Gene Pcal_2061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_2061 
Symbol 
ID4910239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1913525 
End bp1913995 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content60% 
IMG OID640125814 
Producthypothetical protein 
Protein accessionYP_001056942 
Protein GI126460664 
COG category[S] Function unknown 
COG ID[COG2090] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCAATAA ATAATATCGT GTGCCTAGAG AAAGTGAAGA GGGGCGACGT CCCCCGCGAC 
GTGTTTACCG CACGCGGCCA CCCCAACATC ACTGCCACAA ACAGGAGGAC GCTTGAAATA
ACGAAGGACC CGTATGTGAC AAAGCGGGGC GACTGCATAG TGGCTTGTTG CGCCGAGAAG
GCGGCTGGCG AGCTAGACGC ACAAGTGCTC CACGCCTTGG CGCATGAGGG CACCGTGGTG
ATAATACTCG ACGTAGGCAC AGCGGTGGAC TACGTCGTGG GCAAAACGCC GAGGTGGACG
CCCACCTCCC GCTGGCGGCT CGTGGTCAGG AAGTCGGAGT ACGTGGACGA GTCCACGGTG
GCCGTGGCCA GTGACAAGTC CGCGGCAGAG CTGGATAGGA GGCTGGTGGC AGAGCTTAAG
AGAGGCGCCC CGCTGAGGGT CATAGTGGGC GTCTGCCCAA AGGATATATA G
 
Protein sequence
MSINNIVCLE KVKRGDVPRD VFTARGHPNI TATNRRTLEI TKDPYVTKRG DCIVACCAEK 
AAGELDAQVL HALAHEGTVV IILDVGTAVD YVVGKTPRWT PTSRWRLVVR KSEYVDESTV
AVASDKSAAE LDRRLVAELK RGAPLRVIVG VCPKDI