Gene Pcal_2058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_2058 
Symbol 
ID4910171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1911763 
End bp1912494 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content56% 
IMG OID640125811 
ProductATP-NAD/AcoX kinase 
Protein accessionYP_001056939 
Protein GI126460661 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0061] Predicted sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCACAT TTGCAGTCTT CTACAGGCCT GACCTGGGCG AGTTGGCTGA GGCTGTGAAG 
AGGGAGTTTA ACGCCGTGGA TCTGAGTTGC GGCGTGGGTT TTTCCCACGT GTTAATCCTC
GGGGGGGATG GGACCTTGCT TGAGGCCATT AGGCGTTTTC CGTGTATTTT TGACTCTGTG
GTGGTGCACC TAGGTCTTGG GAGGGTGAAT TTTTACAGAA GCGCTGAGGT GCCTATGCCG
CCTAGGGAGG CCATCACGCG CATAATAAGC AACGATTACA AGGTTGTGGA CTTGGCCACG
CTGGAGGCGG GCGGCTGCAC GGCGCTTAAC GAGGTTTCCT TTTTTAGGAG GGAACACGGA
CGTCTGTTGA GTTTTAAGAT TTTGACTGAG GAGGGCGAGA TAGCCGGGAG GGCGGATGGG
GTTATTGTCT CAACGCCTCA TGGGACAAGC GGCTATGTGG TGTCCACCTA TGGCCCCATT
GTGGACTACA GAGCCGACGT CGTAGTGGTC TCCTTTGTGG CCCCCTTCAC TCTCTTCCTA
AGGCCTCTGG TGCTTAGCTC TAGGCGCGTG GAAGTGGAGG TGGGGGAGGA GGCGGTTATG
ACTTGCGACG GCAGAGAGGG CGGCGTTGGG AGGCGGTTTG TCGTAGAACG AGGCAAGAGG
CGGCTGAGGC TGGCCGTGTT TGGGGAATTC AACTTCTTGA ATAGAGTGAT GGAGCGGCTC
AGGAGCCTAT GA
 
Protein sequence
MSTFAVFYRP DLGELAEAVK REFNAVDLSC GVGFSHVLIL GGDGTLLEAI RRFPCIFDSV 
VVHLGLGRVN FYRSAEVPMP PREAITRIIS NDYKVVDLAT LEAGGCTALN EVSFFRREHG
RLLSFKILTE EGEIAGRADG VIVSTPHGTS GYVVSTYGPI VDYRADVVVV SFVAPFTLFL
RPLVLSSRRV EVEVGEEAVM TCDGREGGVG RRFVVERGKR RLRLAVFGEF NFLNRVMERL
RSL