| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_2054 |
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| Symbol | |
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| ID | 4909365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1906145 |
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| End bp | 1907776 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640125807 |
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| Product | NADH/ubiquinone/plastoquinone (complex I) |
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| Protein accession | YP_001056935 |
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| Protein GI | 126460657 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCGCTT TAGAGCTACT CCTGGCGCTA CCTTTCATAG CCGCGGCGCT GGACCTGTTG
ACGAGACGCG GCATATTCGC AGTGGCCACC TCGGCGGCTG TGGCGGCGGC TCTGCTTCTG
GGCTCAAGCC CTACCACTCA CCTATTTAGA CTCGATGGAC ACATACTGGG CCTGTTGGTC
TTTGTCTCGG GCATATACGC GGCCATATCC CTCTACTCAA TCTTCTATAT GAGGGGCAAC
CAGCGGCTTG GGTGGTTCTG GGCCTGGATG AACTTGTTCT ACGGCTCTAT GCTCGTCTTC
GTCTCGGCAG ACCACTGGAT CCTCCTCGCG GTAGGGTGGG GAGGCCTCGA CATAGCCAGC
TGGGGCCTAA TCCTCACGTA CAGAGACGAA GAGGACGCGG GAAGGGTGGG GCTTGGGGAG
AGGTTCTGGG GTCTCACATG GCTGTGGACT CCGAGCGCCT CTGCCCTTAG GGCCATTTTG
ACCGTGGAGG TGGGCTCCGC CTCCCTCCTC GCCTCTCTGG GCATGGCCGC GGCGCAGTAT
GGCGGCTACA TCTCGCAGTG GGTCGCCCTA GGCGACTTGG CGGCCGCCCT TTTGCTCGTG
GCCGCGTTTG CCAAAGCCGC CCAGCTCCCC TTCACAGACT GGCTTATGAC GGCAATGTCG
GCGCCGACGC CGGTGAGCGC GTTACTCCAC TCCTCCACCA TGGTCAAGGC TGGGCCCATC
CTCCTGCTCA AGTTCGGCTC GTTGATGCCC ACGTGGGCCG CCGACGTGGC CTTCGCCGTC
GGCATAACCA CAGCCCTCTA CGGCGGGCTG GTGGCCCTGG CCCAGAGGGA GCCCAAGGTC
CTGCTCGCCG CCTCCACCGC CTCCTATCTG GGCTTAATAA CGGCGTTTTC TCTCAAGAAC
CCCCATGAAG CGCTGTGGCT CATATACGCC CACGGCGTGG CCAAGGCCAC ATTGTTCATG
GCGGTGGGCC ACGCGATCCA TGAGACTCAC AGCAGAACGC CCGGGGCGTA TCCCCTAGCC
GCCAAGGCCG CCATGGCGCT GGCGCTTCTG ACGCTGGCGG GGCTGACCCC CCTCGGCGCC
TTGGCCAAAG AACACGCCGA CGTCTGGGTA CTCGCCTTCT CGGCGCTCAC GGCGGGCTAC
GTGGGGAAGC TCCTCCTTAG AACTGGCACA GAGGGCACGG GCCTTGGCCC AATGGCGTTG
CCCTACCTAG GCGTGGCCTC CTCGGCGTTT TTAGTGCCAG CGTTGCCGAA CCCCCTCTGG
GCCCTGGCGC TGATGGGCCT GGCGCTGGCA TATGTCCCGC CTCCGCGCGT GTTATACGCC
AGGCTCGGCC TGCCCCTGCT ATACGACCTA GCGGCCCCGA GGGCGTTTGA CGCTGTAAAG
AGGGCGGTGG CGATAGGGGA CAGAGCAGTC GACCTCCTAA TCTTTAAGTC CATCGACGCG
TGGAACGCCT TGGTCAAGCT AACCGCCACG GCAGACCGCG TTGTTGACCT AGCTCTACAC
GGCGCGTTGC CCACGGCGCT TGCCGCGGCG TCGCGGCAGA TCTCCAAGAG GAACTTCGAC
TACTGGCTCT ACGTAGCGGG TACGGGCATA GGCGTGGCGC TTGTGTTGGC CTTGGTAGTG
TTATGGAGGT AG
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| Protein sequence | MVALELLLAL PFIAAALDLL TRRGIFAVAT SAAVAAALLL GSSPTTHLFR LDGHILGLLV
FVSGIYAAIS LYSIFYMRGN QRLGWFWAWM NLFYGSMLVF VSADHWILLA VGWGGLDIAS
WGLILTYRDE EDAGRVGLGE RFWGLTWLWT PSASALRAIL TVEVGSASLL ASLGMAAAQY
GGYISQWVAL GDLAAALLLV AAFAKAAQLP FTDWLMTAMS APTPVSALLH SSTMVKAGPI
LLLKFGSLMP TWAADVAFAV GITTALYGGL VALAQREPKV LLAASTASYL GLITAFSLKN
PHEALWLIYA HGVAKATLFM AVGHAIHETH SRTPGAYPLA AKAAMALALL TLAGLTPLGA
LAKEHADVWV LAFSALTAGY VGKLLLRTGT EGTGLGPMAL PYLGVASSAF LVPALPNPLW
ALALMGLALA YVPPPRVLYA RLGLPLLYDL AAPRAFDAVK RAVAIGDRAV DLLIFKSIDA
WNALVKLTAT ADRVVDLALH GALPTALAAA SRQISKRNFD YWLYVAGTGI GVALVLALVV
LWR
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