| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_2028 |
|---|
| Symbol | |
|---|
| ID | 4908643 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum calidifontis JCM 11548 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009073 |
|---|
| Strand | + |
|---|
| Start bp | 1882081 |
|---|
| End bp | 1882467 |
|---|
| Gene Length | 387 bp |
|---|
| Protein Length | 128 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640125781 |
|---|
| Product | dinitrogenase iron-molybdenum cofactor biosynthesis |
|---|
| Protein accession | YP_001056909 |
|---|
| Protein GI | 126460631 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1433] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.0000000280293 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCTTAATA ACTACAAACC CTACGCCTAT ATGCGCGTCG TTGTTCCCCT AGATGAGAAT
AGGGGGTGGG ACTCCAAGAT ATCGGACGAG TTCGGCCACG CCCCCTACTT CGCCCTCGTA
GATGGAGACA GTTTGACAAT AGTAGAGGGG CCGAAGGTGA TAACTGGGAG AGGGCCTAGG
TGGGCCGAGC TGTACACTAA GCTGAAGCCC GATGTAGTGA TCACAAAGGA GATCGGGAAG
CCAGCGTACG CCGCCTTTAG GCAAAAGGGC GTCACCGTGT ACTACGCAGA CGCCAAGACG
CTGAGAGAAG CCGTGGAGAA GTGGAAGAGA GGCGAGCTAA GAGAGTTCCC CGAAGAGCTA
GCCCACGAGC CCCACCACGA ACACTAA
|
|---|
| Protein sequence | MLNNYKPYAY MRVVVPLDEN RGWDSKISDE FGHAPYFALV DGDSLTIVEG PKVITGRGPR
WAELYTKLKP DVVITKEIGK PAYAAFRQKG VTVYYADAKT LREAVEKWKR GELREFPEEL
AHEPHHEH
|
|---|
| |