| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_2025 |
|---|
| Symbol | |
|---|
| ID | 4910188 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum calidifontis JCM 11548 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009073 |
|---|
| Strand | + |
|---|
| Start bp | 1879528 |
|---|
| End bp | 1879827 |
|---|
| Gene Length | 300 bp |
|---|
| Protein Length | 99 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640125778 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001056906 |
|---|
| Protein GI | 126460628 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.0000000258314 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGGTGCTG GGGAGGTCGC CGCCGCAGTG GCAACGCTGG CGGTGGGAAT TTACTTAATT
TTGGCATCTC TAGGCACAGT GCCCCTGGCC GTGAATTTCC TGCTCGGGCT AGCCGCGGCC
ACCTTCGGCG TGTCCTACGC CGTAGTAGGT AGGACGAGGG AAGCGGCCTT TTGGGGAGGG
CTCTTGCTAA TTGTTGGCGT AGCCCTCATC TACGGCGGCG GTGCGTCGCC CCTCCTCGTA
GTCGGCGTAG TGCTGGTCTT CGCCTCGCTG GTTGCCCTGC TAAGTCTCCT GCGCAAGTAA
|
|---|
| Protein sequence | MGAGEVAAAV ATLAVGIYLI LASLGTVPLA VNFLLGLAAA TFGVSYAVVG RTREAAFWGG
LLLIVGVALI YGGGASPLLV VGVVLVFASL VALLSLLRK
|
|---|
| |