| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_2000 |
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| Symbol | rpl5p |
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| ID | 4908386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1856504 |
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| End bp | 1857040 |
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| Gene Length | 537 bp |
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| Protein Length | 178 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640125752 |
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| Product | 50S ribosomal protein L5P |
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| Protein accession | YP_001056881 |
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| Protein GI | 126460603 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0094] Ribosomal protein L5 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTGGA AGGAGCTTGT TCTTGTTAAA GACCACCCAA TGAAACGGGT GTACATAGAG
AAGGTCGTGG TAAACATAGG GGTGGGCACC GGCGGCGAGA GACTTGAGAA GGCGGCTAAT
TTGCTGAGGG AGCTAACGGG GGCGGAGCCC TCGCTGAGGA GGGCCAAGCG CTCGATTAAG
GACTTTGGCA TTAGGAAGGG GGAGCCCATC GGCGTGGCAG TTACGCTGAG GAGAGACAAG
GCCGTGGAGT TCCTCATGCG CGCCCTCCAG GCCGTGGGCA ATAGGATAAA GCGCAGCAGC
TTCGACGAGA GGGGCAACGT GTGTTTTGGC ATAAAGGAGC ACATAATGTT GCCGGGCGTG
AAGTACGACC CGGCCGTGGG CATATGGGGC ATGGACGTGT GCGTCCGCCT GGCGAAGCCG
GGGCTGAGGG TGCAGCTTAG AAGGCGGAGG AGGAGCAAGG TTGGGAAGGG GCAACTGGTG
ACTAGGGAGG AGGCGGTGGA GTTTTTCCAA AAGGTGCTGG GGGTCCAGGT CGACTAG
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| Protein sequence | MKWKELVLVK DHPMKRVYIE KVVVNIGVGT GGERLEKAAN LLRELTGAEP SLRRAKRSIK
DFGIRKGEPI GVAVTLRRDK AVEFLMRALQ AVGNRIKRSS FDERGNVCFG IKEHIMLPGV
KYDPAVGIWG MDVCVRLAKP GLRVQLRRRR RSKVGKGQLV TREEAVEFFQ KVLGVQVD
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