| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1997 |
|---|
| Symbol | |
|---|
| ID | 4908976 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum calidifontis JCM 11548 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009073 |
|---|
| Strand | - |
|---|
| Start bp | 1853655 |
|---|
| End bp | 1854251 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640125749 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001056878 |
|---|
| Protein GI | 126460600 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTAAGG CTTTGGTGTT CCACGGGTTT AGGAGCTCGC CTGCCAACGT CCAGTGGCTC
GCCGAGCCTC TCCGCGGCTT AGGCCTAGAG GTCGTGGCGC CGCAGATTAG GGAAGTGGAG
GACGGCTACG AGGCGGGAGT TAGGGAGTTG CCGGTGGTCG TCGCGGCTGG GCACAGCATG
GGGGGCACGG TGGCCCTCCT CCTGGCGGCT AAGAACCCCG GGCTTGTGAA ATGCGTCGTC
GCAGTCGCCG CGCCGGTGGA CAGGAGGCTA CAGCTACAGT ACATATCTCA GTCGAACAAC
CCCTACCTCA GACGTCTTGC AAACGAGCTC ATGGCCCTCG GCAACAAGCT AGAGCTCACC
TCCCCCTCTA GGTACATCGG CAACGGAATG CCCCCCGTGC TCTACATAAG GGGGTCAAAC
GACGACGTGG TGCCAAGGAC ACATGTGGAC ATACTGGCCG GGCTCTCTGA CCGCTTCAAC
TTCCCGCTGG AGATCGTCGA AGTGGAGGGG ATGGGGCACA CCCCCCAGGA GGAGATGCAT
GTGAAACAAG TGGCAGAGGC TGTGGTGAAG TTTGTATCGA GGTGTATGAA AAGCTAG
|
|---|
| Protein sequence | MGKALVFHGF RSSPANVQWL AEPLRGLGLE VVAPQIREVE DGYEAGVREL PVVVAAGHSM
GGTVALLLAA KNPGLVKCVV AVAAPVDRRL QLQYISQSNN PYLRRLANEL MALGNKLELT
SPSRYIGNGM PPVLYIRGSN DDVVPRTHVD ILAGLSDRFN FPLEIVEVEG MGHTPQEEMH
VKQVAEAVVK FVSRCMKS
|
|---|
| |