| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1986 |
|---|
| Symbol | |
|---|
| ID | 4909070 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum calidifontis JCM 11548 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009073 |
|---|
| Strand | - |
|---|
| Start bp | 1845174 |
|---|
| End bp | 1845734 |
|---|
| Gene Length | 561 bp |
|---|
| Protein Length | 186 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640125738 |
|---|
| Product | phosphoribosyltransferase |
|---|
| Protein accession | YP_001056867 |
|---|
| Protein GI | 126460589 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2236] Predicted phosphoribosyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGTGG TAGAGGTCGG CGGGGTAAAA GTGCGCTTTA TTTCGTGGGC TGAGGGGATT
CTGCTGAGCG AGGCCCTGGC AGGCAAAATA CGAGACTCGG GCTATAGGCC CGAGGTGATA
GTCGCCGTCT CAAGAGGCGG CCTAGTGCCG GCTAGAATAA TCAGCGACGT GCTCGAGGTC
GACGACATTG TGGCAGTTGG CGTGAAGTAC TGGGCCCTCG CCCAGAGGAG GGCTGAGAGG
CCGGTGGTGT ACCACGGCGT AGAGCCGGGG GTCATAAGGG GGAGAAAGGC GCTGGTGGTA
GACGAGGTGG CAGACACGGG GCACACTCTT GCCCTCGTAA AAAACCTCCT CGGCCTGCTG
GGCGCCGCGG AGGTGAAAAC CGCGGTCATA CACCTAAAGG CCACCAGCCA ATACACGCCG
GACTACTACG CGGAGAAGGT AGAAGAGTGG GTCTGGATCT CCTACCCGTG GTCCCGGCAC
GAGGACATGC GAGAGTTCAA GAAGAGGGGA TTCGACATCT CTAGATACGT GGAGAAGATC
TGCCCAGGAG AAACGTTTTA A
|
|---|
| Protein sequence | MAVVEVGGVK VRFISWAEGI LLSEALAGKI RDSGYRPEVI VAVSRGGLVP ARIISDVLEV
DDIVAVGVKY WALAQRRAER PVVYHGVEPG VIRGRKALVV DEVADTGHTL ALVKNLLGLL
GAAEVKTAVI HLKATSQYTP DYYAEKVEEW VWISYPWSRH EDMREFKKRG FDISRYVEKI
CPGETF
|
|---|
| |