Gene Pcal_1977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1977 
Symbol 
ID4909384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1837262 
End bp1837636 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content47% 
IMG OID640125729 
Producthypothetical protein 
Protein accessionYP_001056858 
Protein GI126460580 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTACTCAA TGGCTGAGAT AAAAACTCTC TCTCGAACTT ACAGCGATAA AATAGACTCC 
TACCGCGTGA GGCTTATCAC GTTGAAATTC CTAAAAGACC AAGTCCAAAA CGCCAAGGGA
AACCTCATAA CTTTCAGGCC GTCTAAAGTG GCACAAGACC TCCACATATA CGACCGACAA
GACCTAAGGG CGAAGACCGT CCTAATCAGA ACCTTCCTAG ACGACTTAGT GCAGAGGGGG
TACATCACCG TGGTAAAGAG AAGCGCGAGG GGGAAGGTGT ACGGGCTCTA CAAGAGCAAC
AAGTTCTGGG ACCTCCTATC CACGTACGAG CCAGACAAGA TTCTAGAGCT TTTAGAGACA
GAGAAAATTC AGTAA
 
Protein sequence
MYSMAEIKTL SRTYSDKIDS YRVRLITLKF LKDQVQNAKG NLITFRPSKV AQDLHIYDRQ 
DLRAKTVLIR TFLDDLVQRG YITVVKRSAR GKVYGLYKSN KFWDLLSTYE PDKILELLET
EKIQ