| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1972 |
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| Symbol | |
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| ID | 4909451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1834503 |
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| End bp | 1835231 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640125724 |
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| Product | photosystem I assembly BtpA |
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| Protein accession | YP_001056853 |
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| Protein GI | 126460575 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0434] Predicted TIM-barrel enzyme |
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| TIGRFAM ID | [TIGR00259] membrane complex biogenesis protein, BtpA family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTGATAG GCGTCGTCCA CCTACTGCCG ACCGGGTCCC CCCAGCGCCT AGAACATGCG
GTTAGAAGCG CCAAGAGGCT CGAAGAGGCC GGCTTCGACG CAGTGATAGT GGAGAACTAC
TACGACATGC CGTTTAAGCC CAAGGCGGAC TTCGAAGCCG CAGTGGCCAT GGCCGTGGCG
GCGAGGGAGG TGGCCAGGGA GGTCTCACTG CCCGTGGGGA TAAACCTGCT GAGAAACGCA
TGCGTAAAGG CCTCAATAAT AGCGAGACAC GTGGGCGCCA CGTTTATCCG CTGCAACGCG
TACACGGACA TAGTCCTCTC CGAGTCGGGA ATCTTAACCC CCCAGGCCCC CTACATAAAG
GGCGTCAAAG TGCTCGCAGA CGTCCACGTA AAACACGGCG AAAGCATTTA CCCGCGGACA
CTCGCCGAGG CGGTGGAAGC GGCTTCCACA AGGGCGGCAC CAGCCGCCAT AGTAGTCACC
GGCAGAAAGA CGGGGGAGGC CCCAGACCCA GTAGACTTGG CGACGGCGAG GGCGTACACA
GACCTCCCAG TGCTAGTGGG AAGCGGCATA TGCTTCCAGA CCCTCCCCCT CTTGAAAATA
GCAGACGGCG CAATAGTCGG CACATGCGTA AAAGATGGTG CAGAGATAGA CCCCGAGAAG
GCAAGACGCC TCGTAAGAGA GGCAAAGGCA GTGCTCAAGC CCAAGAGGCC ATTGCAGCTG
AAGTCCTAG
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| Protein sequence | MLIGVVHLLP TGSPQRLEHA VRSAKRLEEA GFDAVIVENY YDMPFKPKAD FEAAVAMAVA
AREVAREVSL PVGINLLRNA CVKASIIARH VGATFIRCNA YTDIVLSESG ILTPQAPYIK
GVKVLADVHV KHGESIYPRT LAEAVEAAST RAAPAAIVVT GRKTGEAPDP VDLATARAYT
DLPVLVGSGI CFQTLPLLKI ADGAIVGTCV KDGAEIDPEK ARRLVREAKA VLKPKRPLQL
KS
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