Gene Pcal_1954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1954 
Symbol 
ID4909636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1818953 
End bp1819315 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content60% 
IMG OID640125705 
Producthypothetical protein 
Protein accessionYP_001056836 
Protein GI126460558 
COG category[S] Function unknown 
COG ID[COG3398] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATATTT TTCTCCACAT CGCCCGTTGC CCCGGGCCGT ACTTTAGGCT GTTGGCCAAG 
GAGTTGGGGA TGCCCATAGG CACCCTTAAG TATCACTTGG ATAAGCTGAC TAGAGACCGC
CTCGTCTATA CGCTGGGGAG GAGGCCCCGG TACTTCCCCT ACACTATGCC GGTGGAGGAG
GCCGCCGTTG TCTACCTTGT TAGGGAGGGG CCCGGGGCCC TGGACGCCGT GGAGGTGAGG
CGTTGTGGGC GGAGGCTCTG CCCAGAGATA AAGGAGCTGG CAATGGCCCT CGTGAGGCAG
TACCCCTGCC TCCAGAGAGA CCTCGTGGCC AACTTCATCG ACCTCTTCTC CCAGCTACTA
TAG
 
Protein sequence
MDIFLHIARC PGPYFRLLAK ELGMPIGTLK YHLDKLTRDR LVYTLGRRPR YFPYTMPVEE 
AAVVYLVREG PGALDAVEVR RCGRRLCPEI KELAMALVRQ YPCLQRDLVA NFIDLFSQLL