Gene Pcal_1939 details

Gene Information

• Locus tag: Pcal_1939
• ID: 4908315
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pyrobaculum calidifontis JCM 11548
• Kingdom: Archaea
• Replicon accession: NC_009073
• Strand: -
• Start bp: 1804814
• End bp: 1805398
• Gene Length: 585 bp
• Protein Length: 194 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 640125690
• Product: hypothetical protein
• Protein accession: YP_001056821
• Protein GI: 126460543

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 34
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGGCTGGGG CGTCTCTCGG CGCGGTTTTG GCGGCGTTTT GGTGGCGCTG GGGTGGGGCG 
GGTGGCGGGA GTGCGGGGGG TGTTAGGCGG TGTGGGGAGG TGCGGCTTGT CTACGGGAGA 
GAGGAGTGCC CGGTGTGTAA GATGGTGGTG GACTACCCGC CCTCTTCTGC GGCGATGAGG 
GCCAGGGTGA GGGGGGTGGA GAGGTGGTAC TTCTTTGACG ATTTAGGCTG TATGGCTGTT 
TGGTATAGGG AGGTGGAGAG GCAGGGCGGC GAGGTGTTGG AGGTCTGTGT GCGCGATAGA 
GTGGACGGGG GCTGGATCAG GGGGGAGGAT GCCGTGTATT TGGCGACGGG TGAGTTTACG 
GCTATGCAGA CGGGGATTGT GGCTGTCTCG CCCGACAACG TGGAGGCTTA CCGGAGGGGC 
GTGGTGAAGG GGCCGTGGCG CATAGAGACG CTGGACGGGC CGCAGAACTA CTCCCCGCCG 
CCTCCCGGCG AGGTGAGGGG CGTGGTGGAC TTTAAATGTC TCGTGGAGAA GTTTGACTAT 
GGGGCTGCGT GGTCTGTTGA TCCTAATTGG TATCGCGGTT GCTAG 

 

Protein sequence

MAGASLGAVL AAFWWRWGGA GGGSAGGVRR CGEVRLVYGR EECPVCKMVV DYPPSSAAMR 
ARVRGVERWY FFDDLGCMAV WYREVERQGG EVLEVCVRDR VDGGWIRGED AVYLATGEFT 
AMQTGIVAVS PDNVEAYRRG VVKGPWRIET LDGPQNYSPP PPGEVRGVVD FKCLVEKFDY 
GAAWSVDPNW YRGC