| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1934 |
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| Symbol | |
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| ID | 4908288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1800678 |
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| End bp | 1801835 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640125685 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001056816 |
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| Protein GI | 126460538 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAGC TGGCCCTCTT CGTGGCGGTG GCCCTCCACA TGGTGGGCTT CGGCGCTGTG
ATCCCAGTCA TGCCCACCTT GGTCAAGTCT CTGGGTGGAG ATGCTGTGGT GCAGGGGCTT
TTGACCTCCG TATTTACCCT CGCCCAGCTC GCCTCTGCGC CTCTGTGGGG CTGGGTGTCC
GACAGAGTGG GCAGGCGGGT CATCATCGCC GCCGGCCTCG GCCTAGCGGC CCTGGGTCAC
GCCGGCCTCT ACCTCGCGAG AGACCTCCCC ACAGCCTTCG TGGCAAGGGC CATCGCCGGC
CTCGGCGGAG GGACGCTTCC AGCAATACAA GCCGCCGTGT TGGAGCTCAG CCGCCCAGAG
GAGAGGGCCG CCTCCATGGC CCTATTCGGC ATGGCCTTCG GCGTGGGGTT CGTCCTAGGG
CCACTAATTG GGGGCGTGGT GGCCGTTCTA TCTCCACGGG GCCCATTCCT CACGGCGGCC
CTCCTCTCAG CCACGGCTGC GCTGTGGACA GCCGCTGTTT ATAGGTCCCC AGCAAGTCCG
CCGGTGCCCA AGGCAGGTGG GGGCGGCGGC GAAGTGGTGG TGCTGGTCGC CGCGGCGTTT
TTCCTCATGA ATATGTCGTT TAGCCAGTTC GAGTCCATCG TGTCCTACTA CGGGAGCGAC
TTGGGCCTAA CGCCGGCTTA CATAGGCCTC ATGATGGCCT TCGCGGGAGT AGCCGCGGGC
GGCGCGCAGT GGGCTGTGAG GAGGCTGGAG AGGGGAGGCT CCGTTGGCAG AGGCATATCC
GTGGGGCTGG CCGCCATGGC GAGCGGCCTG CTGGCCGTGG CTGTGCCAGC TGTCCCAGCC
CTCTTCGTAG GCGTGGCTGT GGCGTCTGCT GGGCAGATCA TAGCCTCTGC CTTTATCTCC
AAGGCTGTGG CAGAGGGGGC AGAGAAGGTG GGCCTAGCCT TTGGGGTCAT GCAGACTGCG
GGGTCGCTGG GGAGGCTCGT GGGCCCCGCG GCTGGGGGCT ACTTGTACAA GGCGTTGAGC
CCCTCGGCGC CCTTCCTCGC CGCCGCGGCG CTGGCTGTCT TAACTCTGGC CCTCTTCGCG
TATGGCGTAC GTAATTCCCC GGTTGGGACA CGCCTTGGCG GCTCTCTTCA CGTTTTCCAA
GAGGCTCATC GGCACTAG
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| Protein sequence | MAKLALFVAV ALHMVGFGAV IPVMPTLVKS LGGDAVVQGL LTSVFTLAQL ASAPLWGWVS
DRVGRRVIIA AGLGLAALGH AGLYLARDLP TAFVARAIAG LGGGTLPAIQ AAVLELSRPE
ERAASMALFG MAFGVGFVLG PLIGGVVAVL SPRGPFLTAA LLSATAALWT AAVYRSPASP
PVPKAGGGGG EVVVLVAAAF FLMNMSFSQF ESIVSYYGSD LGLTPAYIGL MMAFAGVAAG
GAQWAVRRLE RGGSVGRGIS VGLAAMASGL LAVAVPAVPA LFVGVAVASA GQIIASAFIS
KAVAEGAEKV GLAFGVMQTA GSLGRLVGPA AGGYLYKALS PSAPFLAAAA LAVLTLALFA
YGVRNSPVGT RLGGSLHVFQ EAHRH
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