| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1931 |
|---|
| Symbol | |
|---|
| ID | 4908350 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum calidifontis JCM 11548 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009073 |
|---|
| Strand | + |
|---|
| Start bp | 1797992 |
|---|
| End bp | 1799260 |
|---|
| Gene Length | 1269 bp |
|---|
| Protein Length | 422 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640125682 |
|---|
| Product | nitrous oxidase accessory protein-like protein |
|---|
| Protein accession | YP_001056813 |
|---|
| Protein GI | 126460535 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3420] Nitrous oxidase accessory protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTTTC TCTTCCTCTT GGCGGCCCTC GTCTTTGTCC AAGCCAACCC TTTTGAGGCT
ACCTCGCCGG GCTCCTTAAT CGTCCTAAAT GGGACATTCG TTGGCAACTT CGTAATCGAC
AAACCTGTCA CATTAGTCGG AGGAGTGTTC GACGGCGGTG GCAATGGTAC AGTGCTTAAG
ATCGTTGCGA GCGGGGTGAG AATTAAAGGC GTGGTAGTGA GAAATTGTGG TAGAAGTGGG
CTTGACTCTG GTATTTGGAT TGAAAACGCC AGAGATGTAG TAATCGAGGA TGTGACAGTG
GAGGAGTGCC TCTACCCAAT AATGATATAT AACTCGTCGA ATGTAAAAAT TGTGAATAGC
CGTATTGCAA GTTTTAGAAG CGTCCCAGTG GCCCGTTTTG AGCAAGGCGG GGTTGTGGTT
TTACACGAGC TTACGCAGTA TTTTAGGGGC CACGGGGTAT ATGTGTGGTA CTCTTGGAAT
GTCACAGTGG CCAAGTCCTA TTTTACGCAT ACTCTGGACG GAGTTTACTG TGATCATGCA
TATGGGCTAA GGGTTGTCGA TAACGTGTTT TTCAACGGGA GCCGCTACGG GGTACATCTC
ATGTACTGCG CCGGAGTTGT AATAGCCAAC AACACCGTAA GCCAGTATGT CGTCGGCTTT
ATACCCATGT ACAGCGAGAG GGTGGAGATA GTGGGAAACC AAGTCTTCGA CGTGAGAGCC
ATTGGAGGAG CCGCCGTGGT GGTCTTTGAA TCCAACAACG TCACGGTGCG AAACAACATC
TTTGCGCGAA ACTACATAGC CGTAGACTTC TATAGGTCTC CCTTTACCCC AGGTAGCTTC
GTCGAGGTGG TGGACAACGT AATTGCCTAC AACAACATTG GCGTTAGGCT AGACCCCATA
TCGTCGCCTA CGATTTATGG CAACTACTTT GTAGAAAATG TGAGAGATGT TCTTCCGCTT
TTTAACAACA AGGCGCGGCT TTACAACGCC ACCGCCAAGA GGGGCAACTT CTGGGGCACT
TCCACCAGCC GCTACGTGGC TGTGCAGCGG GTCTTTGACC AAATTCTCTC AGAGCACCCC
CAGATGGAGA TCCTCGCGCT ATCCCCCGCC TATGGCCTCA TGGAGTATGT GCTAGGCGTG
GCTTACCCAG GCGGCGGCGT ATTGGAAGAT AAATACCCCA TACCGCCTCC CGGCACCCCC
CACGGCCTCT ACCTGCTCTA CTTGGCCCTC GCTTCAGTGC TCTTAGCCTA TGTCTGGCGT
CGCAGTTAG
|
|---|
| Protein sequence | MFFLFLLAAL VFVQANPFEA TSPGSLIVLN GTFVGNFVID KPVTLVGGVF DGGGNGTVLK
IVASGVRIKG VVVRNCGRSG LDSGIWIENA RDVVIEDVTV EECLYPIMIY NSSNVKIVNS
RIASFRSVPV ARFEQGGVVV LHELTQYFRG HGVYVWYSWN VTVAKSYFTH TLDGVYCDHA
YGLRVVDNVF FNGSRYGVHL MYCAGVVIAN NTVSQYVVGF IPMYSERVEI VGNQVFDVRA
IGGAAVVVFE SNNVTVRNNI FARNYIAVDF YRSPFTPGSF VEVVDNVIAY NNIGVRLDPI
SSPTIYGNYF VENVRDVLPL FNNKARLYNA TAKRGNFWGT STSRYVAVQR VFDQILSEHP
QMEILALSPA YGLMEYVLGV AYPGGGVLED KYPIPPPGTP HGLYLLYLAL ASVLLAYVWR
RS
|
|---|
| |