| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1921 |
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| Symbol | |
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| ID | 4909301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1788428 |
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| End bp | 1790053 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640125672 |
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| Product | cytochrome d1, heme region |
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| Protein accession | YP_001056803 |
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| Protein GI | 126460525 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3391] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCAGT CCCAGGAGAA GGGTGCTGGG AGACGCGACG TGTTAAAGGC CTTTGCCGCC
GCTGGCCTGG GCTTCGCTGT TGGTAGCTGG GCCCTTGCCT TGAGCCGCGG CGCGCCTGTG
CAGAAGGTGG TGTACGAGAA GGCTGAGGAG GTGAGGGTGA AGCCCGTGGT TCAAGTACAG
CAACAAACCG CGGCGCCGCA GGTGTCCGCG CCTCCCCACG ACGCTTTTCA GAAGAGGGGG
CTCGCCTACT TGAGCGCCGA TTATATACAA AGCACTCTGA GGGTGTTGGT GCCGGAGGAC
CAGCTCCCCA GCAAGCCCAC CGCCTACAAC ATCAACGACT TGGACTGGAT AGCCATACTG
ATTGAGAGCA GATACCACGA GCCGGGCGTG GAGATGGTGG GGGCCTACAC CTTCCTCGAT
ATGAAGAATT TTAAGGTGCT GAAGCGGGTG AAAAACGCGG GGGATAGAGT CCACGTGGTG
AGGTTCGGCC GCGAGGAGTG GCCTGAGCAC AAGAGGAGGT TTGCCCTCGG GATGTCAAGG
GACTGCTGGC TCTCCAAGAT CGACCTCTAC TCCATGCAGG TGGTTAGGCA GATTAAAATC
GGCGTTGACT GCAGAAGCGC GGCGTACGAC AAGGACGGGA AGTACGTAAT AGCTGGCTCC
AAGGACCCGG GCCACGTGGT AATCCTTGAC GCGGAGACCT TCAAGGTGTT GAAGGTTATC
CCATTCCTTG GCGTGAGCAA GTTCTTCCCC ACGCCCATGA TGGGCCGGCA GGGCGCCATA
TTGACAACCG ACTTGGGCTA CTGGCTAGTC AACGTAAAAG ACGCCGAGAT GGTGCTTGTG
ATAGACTACA GAGACCCCTC CTTCCCCATT GTACACGTCT TCACGAGCTA TGACACTAAC
AAGAAGGGGA GAAGCGTCAA AGTCCAAATC GGCGACAAGA CCTACGAGAC CACAGGCATT
GGCAAAAGCC CCCACGAGCT CAACAAGTTG GACAAAGTGG GGAGGTATGT GGCTGTCACA
GGGCAGGAGA GTAGCACAAT TACAATACTC GACGTAGAGA ACTTCGAGGT TGTCAACGTT
ATCCCATGTG GAAAGAAGCC TCACCCAGGC CCCGGCACCC TAGTCCCCAA CAAGTACTTC
CTAACCAACG CCATAGCCGA GGGCAAAATC ACAGTGATAA ACCTACAAAC GATGGACCTA
GAGAAGTACA TAACTTACCC GCAGGAGTTC CCCGCCGACA CAGGCGGCGG CCTCTACTCC
ACGCCGCCGC TCCCTGATGG CACAATACCC AAGGGCTTGG CGTGGTTTGA CACCACGTTT
AATATAAACA AGGGCATATT CGCCGTAGAT ATATACATGC TTGACGTGGC GACGCGGCCG
CCGAAGCCCG CGATATTTGC CGCAAACAAG CCGGGCAAGT GGGCCATGCA CCCCGGCTAT
ACCCCAGACG GGAAGTATGT AATAAGCGCG CTGGAGCGCA CCGACACGGT GTACAAGGTA
GACGCCGAGA CTGGGGAAAT TGTCGGCACC ATAAACCTGA AAAACGTAGA GCCAGTCCAG
CTACTAGAGG AGCCAAGCCC AACGGGCATA TTCCCAGCTT GGCGCATAAA GGCGCCCTGG
TTCTAA
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| Protein sequence | MSQSQEKGAG RRDVLKAFAA AGLGFAVGSW ALALSRGAPV QKVVYEKAEE VRVKPVVQVQ
QQTAAPQVSA PPHDAFQKRG LAYLSADYIQ STLRVLVPED QLPSKPTAYN INDLDWIAIL
IESRYHEPGV EMVGAYTFLD MKNFKVLKRV KNAGDRVHVV RFGREEWPEH KRRFALGMSR
DCWLSKIDLY SMQVVRQIKI GVDCRSAAYD KDGKYVIAGS KDPGHVVILD AETFKVLKVI
PFLGVSKFFP TPMMGRQGAI LTTDLGYWLV NVKDAEMVLV IDYRDPSFPI VHVFTSYDTN
KKGRSVKVQI GDKTYETTGI GKSPHELNKL DKVGRYVAVT GQESSTITIL DVENFEVVNV
IPCGKKPHPG PGTLVPNKYF LTNAIAEGKI TVINLQTMDL EKYITYPQEF PADTGGGLYS
TPPLPDGTIP KGLAWFDTTF NINKGIFAVD IYMLDVATRP PKPAIFAANK PGKWAMHPGY
TPDGKYVISA LERTDTVYKV DAETGEIVGT INLKNVEPVQ LLEEPSPTGI FPAWRIKAPW
F
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