| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1907 |
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| Symbol | |
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| ID | 4908161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1773716 |
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| End bp | 1777534 |
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| Gene Length | 3819 bp |
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| Protein Length | 1272 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640125658 |
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| Product | nitrate reductase, alpha subunit |
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| Protein accession | YP_001056789 |
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| Protein GI | 126460511 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG5013] Nitrate reductase alpha subunit |
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| TIGRFAM ID | [TIGR01580] respiratory nitrate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTTGGCGC TGGCTCAGAA CCTTCAGTAT CTAAAGCCCC TGGCGCAGTT TGTAGACGCC
CGCCTCCAGT ACCCCGACAG GTCGTGGGAG GATATGTACA GGAGGAGGTG GCAGTACGAC
AAGGTTGCCC GCTCTACCCA CGGCGTGAAC TGTACGGGGT CTTGTTCGTG GAATGTCTAC
GTCAAAGACG GCTTGATTGT GTGGGAGCTT CAGGCCACGG ACTACCCCGA CATATCTCCC
GACATTCCCA ACTACGAGCC TAGGGGGTGC CCAAGGGGTG CGAGCTTTTC CTGGTACGTC
TACTCGCCGC TTAGGGTGAA GTACCCCTAC GTGAGGGGGG TGTTGATGGA CATGTATAGG
AGGTTTAAGC AGGAGACTGG GGACCCTGTG GAGGCTTGGA GGAGGATTGT GGAAGATCCC
AACAACCGCC GGGCGTATCA GCGGGCGAGG GGCAAGGCGG GCTGGCGCCG GGTGAGCTGG
GACGAGGCGC TGGAGCTAAT TGCCGCCGCC TTGATATATA CAATTAAGAA GTATGGGCCT
GACAGGATCT ACGGCTTTAC CCCAATCCCG GCGATGTCGC CTGTGAGCTA CGCCGCGGGC
GCCAGATTTA TAGAGCTCAT CGGCGGCGTC ATGGGCTCCT TTTACGACTG GTATGCAGAC
CTCCCGCCGG CCAGCCCCCA GATGTGGGGC GAGCAAACCG ATGTGCCAGA GAGCGCAGAC
TGGTTCCACG CCCAGTACAT GATTGTGTGG GGGACGAACC TCCCCATGAC TCGTACCCCC
GACGCACAGA TGTACACCCA GGCCAGGTAC AGGGGGGCTA AGGTGGCCGT GGTAAGCCCA
GACTACAGCG AACATGTGAA ATTTGCAGAT GTGTGGGTGC CGGTGGCCCC TGGCACAGAC
GCCGCGTTTG GCCTAGCGGC GGCCCACGTG GCGCTTAAGG AGTACTACGT GGACAAGCAG
ATTAAGTGTC TGAGGGAGTA CGCGAGGCGG TACACCGATT TGCCGTTCTT AGTCGTCCTC
GAGCCGCTGG GCGATGGGAC CTACGCCTAT GGCCGCTTCT TAAGGGCCTC AGACGTGCCA
GAGCTCAAGG ACAAGGTTGG CCAAAACCCC GAGTGGAAGA CTGTGGTGGT GCAGAGTGAC
GGATCGCTGG CGGTGCCCTA CGGCTCTATT GGGTTTAGGT GGGATGGTAG CGGCAAGTGG
AATCTCCAGC TGAAGGGGAT AACGGCGAGG GGCGAGGGGG ACATCGACCC TGTGCTCTCG
GTGATGGAGC TTGGGAAGTA TGAAAAGGTG AAGGTCAAGT TCTTCGCCGT CGACTTTGAC
GCAAAGGAGT TTGTCAGAGA GGTCCCGGCC ATTAAAGTGG GCGATAGGTA CGTCACCACG
GTCTTCGACC TCTTGGCGGC CCATCTGGGG GTGAGGCGGG GCGACCTCGG CGGCGACTAC
CCCGCCAGCT ACGACGACCC CAAGCCTTTC ACGCCGGCGT GGCAGGAGGC CATCACAGGC
GTGTCTAGGC AGCTGGCCAT ACAAGTGGCG AGGGACTTCA TGAACACCGC AATTTACTCG
AGGCCGGTCT TCGGCAAGCC GAGCGACCCG CCCTTCTTCG GCGACGACGC CACGCCTTGC
GGCGGGAGGG CCATGATCTT TGTGGGGCCG GGGATAAACC ACTGGTACCA CGCAGACATC
ATTTACCGCT CTGTGCTGTT GCTGGTGTTC CTCGGCGCAA CGCAGGGCAA AAACGGCGGC
GGGTGGGCCC ACTATGTGGG ACAGGAGAAG ATTAGGACTT TGATCGGCTG GTCTACGCTG
GCCTTTGCCC TGGACTGGGT CAGGCCGCCT AGGCAACAGA ACTCTCCCAG CTACTGGTAC
GTGCACACTG ACCAGTGGCG CTACGACCCA ATAACCACTG ACAAGATTTA CCCAGCGCCG
TGGGCTAAGA AGTGGCGCAA TATGCATGAG ATGGACGCCA ACGTAGTCGC GGTGAGGCTG
GGCTGGTTGC CGTTTTACCC AACTCTCAAC GTCAACCCCA TTGAGCTTGG GAGCAGACTG
GTGCAAGAGG CGAGGCAGGC GGGGGTACCC GACGCGCAAC TGTCGGCCTA CGTGGCTAGG
AGGGTAGCCG AGATGCTTAA AAGCGGCGAG GTCAAATTCG CAATAGAGGA CCCAGACGCG
CCGGAGAATT GGCCCAGGGT GCTGTTCGTC TGGAGGGCCA ACCTCATGGG CTCCTCGTCC
AAGGGGCACG AGTACTTCCT CAAGCACCTA CTTGGCACAG ACAACAACGT AACGGCTGAG
GAAGTGGGGA CAAAGCTTGT GAAAGAGGTA AACGTGAGGC CAGCTCCCGA GGGCAAGCTA
GACCTCCTTG TGGCAATAGA CTTCCGCATG GCCACGACCC CCGTGTACGC AGATGTGGTT
CTGCCGACGG CCACGTGGTA TGAGAAGTAC GACTTGTCTA TGACAGACAT GCACACCTTT
ATCCACCCGT TTACCCCCGC CGTGGATCCG CCGTGGGAGG CCAAGAGCGA TTGGGAGATC
TTCAAGGCGT TGGCTAAGAA GTTCTCTGAG ATGGCGCCTA AGTACCTCCC GCAGGAGGCC
TTTGACGTAG TTATGACGCC GTTGATGCAC GACTCGGCGG CGGAAATTGC ACAACCATAC
GGCGAAGTGA AGGACTGGAA GAAGGGCGAG GCGGATGTAG TACCAGGCAA GACTACGCAG
AACGTGTCGC TGGTGAGGAG GAGGTATTGG GACGTGTACG ACATGTATGT GTCGCTGGGG
CCGCTGGTGG TTACAGTGGG CCTATCGGCC AAGGGCATTC CGGCGTTTAA GCCAGTGGAA
CAGTACAGCT GGCTTAGGGA GAGGAACGGC GTGTCCCAGC CTACCTCGGA CTACGTGAAG
ACGCAGTGTG CAAATGTAGG AGGCTGTCCG AGCATTGAGC TAGATAAACA GGCCGCCGAA
GCCATCTTGG CCATCTCGCC GGAGTCCAAT GGCGAAGTGG CCTACATGGC GTGGTCAAAC
CTGGAGAGAG TGGTGGGCCT CTCGCTTAAG GACCTCCCCG CCAGGGAGCT CCGCATCACG
TTTGACGACG TCGTCGCTCA GCCGAGGAGG GTCACGACGT CGCCTGTGTG GAACGGCATT
GAGGCGCCTG GGAGGACGTA TTCGCCGTTT ACTGTGAACA CGGAGCGCCT AGTGCCTTGG
CGCACTTTGA CGGGAAGGCA GCACCTCTAC ATTGACCACG AGTGGTTTAG GGAGTTGGGA
GAGTCGTTCC CCATATATAA GAGGCCTTTG GATGTCGTGT TGGTGAACGT TGTTAACAAG
TTTGCCAGCG TGTCAGACTT CTGGTACGAC CCTGCCAAGT ATAGGAGGGA GGTGGGGGGC
GAGCGGAGGC TTGTGTTGCG CTTCTTGACG CCGCATGGGA AGTGGAACAT ACACTCTGAG
TACTGGGACA ACCTCATTAT GCTCACGCTG TTTAGAGGTG GGCAGGTGGT CTGGCTCAAC
GACGAGGACG CCAAGTGGGC TGGCATAAAC GACAACGACT GGATAGAGGT GATCAACGCA
AACGGCGTAA TTGTGGCTAG GGCCGCCGTG AGTCCCAGGA TTCCGAGGGG CACCGCGATT
ATGTACCACG CCCAGGAGAG GCACGTGTAT GTTCCACTTT CTCCCACCAC TGGAAAGCGC
GCTGGCATTC ACAACAGCGT TACTATTACT CACTTAAAGC CCACTAAGAT GGTGGGCGGC
TACGCGCAAC TAAGCTACTC CTTTAACTAC TACGGCCCCA CTGGCGTAAA TAGGGATACT
CTTGTGGTAG TAAGAAAGGC GAGTGGGGTG AGGCTATGA
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| Protein sequence | MLALAQNLQY LKPLAQFVDA RLQYPDRSWE DMYRRRWQYD KVARSTHGVN CTGSCSWNVY
VKDGLIVWEL QATDYPDISP DIPNYEPRGC PRGASFSWYV YSPLRVKYPY VRGVLMDMYR
RFKQETGDPV EAWRRIVEDP NNRRAYQRAR GKAGWRRVSW DEALELIAAA LIYTIKKYGP
DRIYGFTPIP AMSPVSYAAG ARFIELIGGV MGSFYDWYAD LPPASPQMWG EQTDVPESAD
WFHAQYMIVW GTNLPMTRTP DAQMYTQARY RGAKVAVVSP DYSEHVKFAD VWVPVAPGTD
AAFGLAAAHV ALKEYYVDKQ IKCLREYARR YTDLPFLVVL EPLGDGTYAY GRFLRASDVP
ELKDKVGQNP EWKTVVVQSD GSLAVPYGSI GFRWDGSGKW NLQLKGITAR GEGDIDPVLS
VMELGKYEKV KVKFFAVDFD AKEFVREVPA IKVGDRYVTT VFDLLAAHLG VRRGDLGGDY
PASYDDPKPF TPAWQEAITG VSRQLAIQVA RDFMNTAIYS RPVFGKPSDP PFFGDDATPC
GGRAMIFVGP GINHWYHADI IYRSVLLLVF LGATQGKNGG GWAHYVGQEK IRTLIGWSTL
AFALDWVRPP RQQNSPSYWY VHTDQWRYDP ITTDKIYPAP WAKKWRNMHE MDANVVAVRL
GWLPFYPTLN VNPIELGSRL VQEARQAGVP DAQLSAYVAR RVAEMLKSGE VKFAIEDPDA
PENWPRVLFV WRANLMGSSS KGHEYFLKHL LGTDNNVTAE EVGTKLVKEV NVRPAPEGKL
DLLVAIDFRM ATTPVYADVV LPTATWYEKY DLSMTDMHTF IHPFTPAVDP PWEAKSDWEI
FKALAKKFSE MAPKYLPQEA FDVVMTPLMH DSAAEIAQPY GEVKDWKKGE ADVVPGKTTQ
NVSLVRRRYW DVYDMYVSLG PLVVTVGLSA KGIPAFKPVE QYSWLRERNG VSQPTSDYVK
TQCANVGGCP SIELDKQAAE AILAISPESN GEVAYMAWSN LERVVGLSLK DLPARELRIT
FDDVVAQPRR VTTSPVWNGI EAPGRTYSPF TVNTERLVPW RTLTGRQHLY IDHEWFRELG
ESFPIYKRPL DVVLVNVVNK FASVSDFWYD PAKYRREVGG ERRLVLRFLT PHGKWNIHSE
YWDNLIMLTL FRGGQVVWLN DEDAKWAGIN DNDWIEVINA NGVIVARAAV SPRIPRGTAI
MYHAQERHVY VPLSPTTGKR AGIHNSVTIT HLKPTKMVGG YAQLSYSFNY YGPTGVNRDT
LVVVRKASGV RL
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