Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_1877 |
Symbol | |
ID | 4910159 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | - |
Start bp | 1743538 |
End bp | 1744740 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640125628 |
Product | AAA family ATPase |
Protein accession | YP_001056759 |
Protein GI | 126460481 |
COG category | [R] General function prediction only |
COG ID | [COG1373] Predicted ATPase (AAA+ superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.785569 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTAAAGG AGATGACTCT GGAGTACGTC GAGTCGCTGA AGTACGTAGA CGAGATACCG CGGAGGTTCG CCCTCCCAGA GGCGGGGAGC GACATAGTGG CTGTGGTGGG GCCGCGGCGC GTGGGAAAGA CCTTTACACT GTTGAAAAAG GCCGCGGAGA CGTTGAAGGC CGGGGGCCAG GCCGTCTACG CCACCTTTGA CAACCCAGAG CTGAGGAAGT GGAGCGCCAA GAAGCTGGCA GAGGAGGTGC GCTCTCTCTA CCCCAAGGGC AGAGTGGCCC TCTTCTTAGA CGAGGTGCAG GAGTGGCCCA ACTGGGACTA CAACCTTAGG TGGCTACACG ACGTGAAGGA CTTCCAGATA TACGCCACGG GCTCCACCTC GGCCCTCTCC GTAGACCAAG TGCCGAGCCG CCTCAGAGGC AGGTACATCT CCAAGCTACT CCTGCCGCTC TCATTCGCCG AGTTGGCCCA CGGCACGGCG CCCCACACCT TCCGCGAGAG GGGGGCCCTC AAGAGCCTAC TCGACGACTA CCTCAAATGG GGCGGCTTCC CCGAGGTGTG GAAAAGCCGC TCACTCGACA AAGTGAGAGC CCTCCTCGAC ACAGTCTTCT ACAGAGACGT AGTAGAGGCC AGGGGAGTCA GAGAGCCTGA GGAATTCGAG GCTCTCTTCT ACACAGTCGT AGAGAACTAC GCCAACCCAG TCACCTGGCG AAGCCTCGCC CGCGCCCTCG CCTCAGAGGG AGTAGAAATA GACCCCAAAA CCGTGATAAA ATACGTCAAA TACATGCAGT GGGCCTACCT AATATTCGTC GTGCCCCCCT ACGGCAGGCG GCGGGGAGCC CCCCGCAAGA TATACCTCGT AGACCCAGCC TTCACAAATT TGACAAAAGC CGGGCTAGAC AAGGGGCGGA AAATAGAAAA CGTGACATAC CTACACCTAC TGAGAAAAGC CATCGAAGAA GGCGGGAAGA TCTACTACAT CAAAAACAGA GAAGAAGTAG ACTTCTACTA CGTGGGCCAG GAGAGGGCCG TAGTAGAGGC CGCCTACGAC CCCGACGAGA GCCACATACG AAAGGCCGCC AAAGCCGCCG AAAAACTAGG ACTAAAAAAA GCCCACGTGG TCACATGGGA CACAGAGGAC ACGCGGCGCG TCGGCCAAGT CGACATAGAG ATAACCCCCC TATGGAAGTG GCTACTCCAG TAG
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Protein sequence | MLKEMTLEYV ESLKYVDEIP RRFALPEAGS DIVAVVGPRR VGKTFTLLKK AAETLKAGGQ AVYATFDNPE LRKWSAKKLA EEVRSLYPKG RVALFLDEVQ EWPNWDYNLR WLHDVKDFQI YATGSTSALS VDQVPSRLRG RYISKLLLPL SFAELAHGTA PHTFRERGAL KSLLDDYLKW GGFPEVWKSR SLDKVRALLD TVFYRDVVEA RGVREPEEFE ALFYTVVENY ANPVTWRSLA RALASEGVEI DPKTVIKYVK YMQWAYLIFV VPPYGRRRGA PRKIYLVDPA FTNLTKAGLD KGRKIENVTY LHLLRKAIEE GGKIYYIKNR EEVDFYYVGQ ERAVVEAAYD PDESHIRKAA KAAEKLGLKK AHVVTWDTED TRRVGQVDIE ITPLWKWLLQ
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