Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_1837 |
Symbol | |
ID | 4908356 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | + |
Start bp | 1698771 |
End bp | 1699556 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640125587 |
Product | uridine phosphorylase |
Protein accession | YP_001056720 |
Protein GI | 126460442 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG2820] Uridine phosphorylase |
TIGRFAM ID | [TIGR00107] purine-nucleoside phosphorylase, family 1 (deoD) [TIGR01718] uridine phosphorylase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.748158 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACAAA GGCCGCAGAT AGGGCACAAG GCGTACCACT TGTTGATAGG CCCCGGCGAC GTCCCGCGCT ACGTCCTCCT GCCAGGGGAC CCCGGCCGCG TCCCACTTAT TGCAAAACAC TGGCAGGAGG CTAGAGAAGT GGCGCGCAAC AGAGAGTTTA CGACGTGGGT GGGCATATAC AAGGGGGTTA GGATAGCGGC CACCTCCACG GGCATAGGGT CTGGCTCCAC CGCCATTGCG GTAGAGGAGC TCCTTTACGC AGGCGCTGAT ACGCTCATAA GAGTGGGGAC CACCGGCGCG CTTAAGAGGG AGATAAAGCT GGGCGACTTG ATAATCGGCA CCGCCGCCGT CAGGTGGGAG GGGGCAAGCC GCTGGTATGC GCCTCCTGAG TACCCCGCAG TTGCCCACTG GCAAGTGGTA AAGGCCCTCG TCGACGCGGC GGAGGGACTC GGCGTGAGAC ACCACGTGGG CATTGTGGCC TCCACCGACT CCTTCTACGT TGGACAAGAG AGGCCAGGGT TCCGGGGCTT CATGCCGCCT TGGGCGAGGG GGCTTATAGA GACTTTGAGA AGCCTCAGGG TGCTGTCCTT TGAAATGGAG TCTGCCACAA TTTTTACCCT TGCCTCTATC TATGGGGCGC GGGCCGGCGG AGTCTACGCG GCCATAGCCA ACAGAGAGAC CGACGAATTT CAGCCAGAGG TGGGGGTTGA GGACGCAATA AAGGTGGCCA ACGAGGCGGT TAAGATATTG GCGGAGCATG ATAATAAAAG TGGTGCAGGT ACGTGA
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Protein sequence | MAQRPQIGHK AYHLLIGPGD VPRYVLLPGD PGRVPLIAKH WQEAREVARN REFTTWVGIY KGVRIAATST GIGSGSTAIA VEELLYAGAD TLIRVGTTGA LKREIKLGDL IIGTAAVRWE GASRWYAPPE YPAVAHWQVV KALVDAAEGL GVRHHVGIVA STDSFYVGQE RPGFRGFMPP WARGLIETLR SLRVLSFEME SATIFTLASI YGARAGGVYA AIANRETDEF QPEVGVEDAI KVANEAVKIL AEHDNKSGAG T
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