Gene Pcal_1835 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1835 
Symbol 
ID4910192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1697591 
End bp1698523 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content60% 
IMG OID640125585 
Productmevalonate kinase 
Protein accessionYP_001056718 
Protein GI126460440 
COG category[I] Lipid transport and metabolism 
COG ID[COG1577] Mevalonate kinase 
TIGRFAM ID[TIGR00549] mevalonate kinase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.782527 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTAT TTGCCCCCTG TGTCGTCAAG TTTTTTGGCG AGCACGCGGT GGTGTATGGC 
AAGCCGGCAA TAGCCGCCGC CATAGATAAG GGGGTCTATG TCGAGTGTGA GGAAGGGGGC
GAGTTGCGTG TGGAGACTGT GGCCCCCCTC TCAGAGGCCG TGTACTACCC GGAGAGGGGC
AGAGTGGAGG GCGTCGGCGT AGGCCGCTTC TTTGCCTACG TCGACGCGGC TCTGGAGGTG
GCGAGAGAGC GGTGGGGGGA CTTGAGGGCG ACGTTTAAGA TCAAGAGCGA CTTTCCCCCC
AGCGTGGGGC TGGCCACGTC GGCTGCAGTG TCTGTGGCGT TGCTCAAGGC ATATTCTCAG
TGCGTCGGCG CAAGGCCTAG TCCCGAGGAG CTTGCGAGGC TGGGCCACAG CGTTGAGTTG
AAGGTTCAAG GCATCGCGTC TCCCATGGAC ACCGCCGTGT CGGCCATGGG GGGCCTTTTA
AAAATTTGGC CAAGCCCCTT CAGAGCCGAG CAAATAGGCG CCGAGTTGCC CCAGTTTTAC
GTCTTGTTGT TGCCGAGGAG GGGGACTACC GGCGAAATTG TGGCAGACGT AAGGGCGAAG
TTGCAGCGCC GCCCCTCTCT TAAGGCCGTG GTTGAGGCAA TCGGCGAAGT GGTTGAGGAG
GCTCACAAAT GCCTCGTGGC GGGAGACCTG GCTTGTGTGG GAGAGCTTAT GGAAATAAAC
AACTGGCTCC TTGGCGCCCT GGGCGTGGTA GACAGCCGAG TGGTGCAGGC GTTGGAGATA
CTGAGGCCGT TTGTATACGG GGGTAAAATC AGCGGGGCTG GGAGAGGAGG CGCCGTGTTG
ATACTGCCCA GAGACGGAGA CGCCGTTGAG AAAATTCTCA CGGCTATGAA CTACGCGTAT
TACAAGGTCT CCATATACAG AGGCGGGGCA TGA
 
Protein sequence
MKVFAPCVVK FFGEHAVVYG KPAIAAAIDK GVYVECEEGG ELRVETVAPL SEAVYYPERG 
RVEGVGVGRF FAYVDAALEV ARERWGDLRA TFKIKSDFPP SVGLATSAAV SVALLKAYSQ
CVGARPSPEE LARLGHSVEL KVQGIASPMD TAVSAMGGLL KIWPSPFRAE QIGAELPQFY
VLLLPRRGTT GEIVADVRAK LQRRPSLKAV VEAIGEVVEE AHKCLVAGDL ACVGELMEIN
NWLLGALGVV DSRVVQALEI LRPFVYGGKI SGAGRGGAVL ILPRDGDAVE KILTAMNYAY
YKVSIYRGGA