Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_1834 |
Symbol | rplP0 |
ID | 4910071 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | + |
Start bp | 1696557 |
End bp | 1697591 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640125584 |
Product | acidic ribosomal protein P0 |
Protein accession | YP_001056717 |
Protein GI | 126460439 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0244] Ribosomal protein L10 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.798073 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGCCA TTGGCAAGAG GCAGTATGTC AGAGAGAAGA GCTACCCGCC GCGTAAGGTC AGAATTGTAC AAGAGGCCAC TGAGCTGTTG CAGAAGTACC AGTATGTATT TCTCTTTGAC CTCCACGGCC TTTCCGCCAG AATACTCGGC GAGTATAGGT ACAAGCTCAG GCCCTACGGC GCCGTCAAGA TAATTAAGCC GACTCTGTTC AAGATAGCAT ACGCCAAGGT CTACGGCGGG GTGCCGGTTG AAATAGCTGA AAAAGTCCGC GGCGAGGTGG GCTTCTTTTT CACAAATCAC AACCCCGCAG AGGTTGTTAA ACTAGTTGCC AAATACGCGG TTAGAAGAGC CGCCAGGCCG GGGGACAAGG CGCCCTTCGA CATCGTCATA CCCGCAGGCC CCACTAACGC ATCGCCAGGC CCCATAATCT CCAAGTTCGG CAAGTTGAAG ATACCCACTA GGGTACAAGA GGGCAAGATC TGGATTGCAA AAGACACAGT GGTGGCTAAG GCAGGGCAGG AGATTACACC CGAGATGGCC GAAGTGTTGA GAGTAGTGGG GATAGAGCCC ATATTCGAGT CGCTCCGCCT CATCGGAGTG CTGTGGAAGG GCAAACGCTT TGTCCCAATA GAGGAGCTCA TAATCGACGT GAAGCAGTAC AGAGAGCTGA TAGAGGCGGC GGCCACCTAC GCGAGAAACT TGGCCCTCAA CGTGGTGTAT CCGACGAGGG AAGTGCTCCA AGTGGTTATA CCAGCGGCGC ATGCGAGAGC CCTCGCCCTG GCTGTCAAGC TCGGCGTAGT GACCAAGGAG ACTCTCCCAG CGCTGTTAAG CAGAGCCGTT GCCGAGGCCA ACGCCCTGGC CGCCGCCGTA GCGCCAAAGG CGCCGGAGCT CGGGCTCTCT GTCGCAGTGG CGCCGCAGCC AGCCGCCCAG CCGCAGCAAG TTGAACAACA GCCCGCCGCG GGAGGGGAGG CTGAGGAGAA GAAAGAGGGC CCAAGCGAGG AGGAAATCGC CGGCTCTCTG GGCGCACTCT TTTAA
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Protein sequence | MLAIGKRQYV REKSYPPRKV RIVQEATELL QKYQYVFLFD LHGLSARILG EYRYKLRPYG AVKIIKPTLF KIAYAKVYGG VPVEIAEKVR GEVGFFFTNH NPAEVVKLVA KYAVRRAARP GDKAPFDIVI PAGPTNASPG PIISKFGKLK IPTRVQEGKI WIAKDTVVAK AGQEITPEMA EVLRVVGIEP IFESLRLIGV LWKGKRFVPI EELIIDVKQY RELIEAAATY ARNLALNVVY PTREVLQVVI PAAHARALAL AVKLGVVTKE TLPALLSRAV AEANALAAAV APKAPELGLS VAVAPQPAAQ PQQVEQQPAA GGEAEEKKEG PSEEEIAGSL GALF
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