Gene Pcal_1830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1830 
Symbol 
ID4908245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1694566 
End bp1694862 
Gene Length297 bp 
Protein Length98 aa 
Translation table11 
GC content52% 
IMG OID640125580 
Producthypothetical protein 
Protein accessionYP_001056713 
Protein GI126460435 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGTCTC TTGAGGAGAA GATTGCCAAC TTGATTAGAG ACATTAGGTG GGTTATTTCC 
ACAGCGGCGC GTCCCGACGA CGAGGAGTTT AAACTCACTG CGCGCTTCCT CTTGCTTTTG
GTGTTCGTGG CGGGGGCCTT TCAGCTCGTG TTTCACGTGG CGAGTGTCTA TATCCGTGGC
GCCGTGTATG GGCAGTGGCT TGCCCCGCTT GACCCAGTGA GAGAGAGTAT AGCTATATTG
ACGTCTCTGA TTGTGGTCTT TGCCGCAATG CTTTACTTGT TGGCTAAGTT GAGGTAA
 
Protein sequence
MSSLEEKIAN LIRDIRWVIS TAARPDDEEF KLTARFLLLL VFVAGAFQLV FHVASVYIRG 
AVYGQWLAPL DPVRESIAIL TSLIVVFAAM LYLLAKLR