| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1829 |
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| Symbol | |
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| ID | 4909964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1693467 |
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| End bp | 1694384 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640125579 |
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| Product | signal recognition particle-docking protein FtsY |
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| Protein accession | YP_001056712 |
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| Protein GI | 126460434 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0552] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00064] signal recognition particle-docking protein FtsY |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.704875 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTTGATA GGCTTAAGAG GACGTTTTCT AAATTTGTAA ACGCGGTTGT ATCTGCGGTT
ACGGAGGACA CGTTGGGGGA GAAGGAGGTT GAGGAGTTTG TGACAGATCT CTACCTTGAG
CTTGTGGAGA GCGACGTGGC GGTGGAGGTG GCCGACGCCC TTGTGGAGGA GCTCAAGAGG
AGGCTAGTCG GCCTGAAGGT GCCTCGGTTT GGGGATAAAG AGGGCGCAGT GAAGCGGGCG
GTGGTGGATT CTGTTCTACA GATCCTCTCC GACGTCCCCG ACGTCGACTT CTACGAGGAG
GGGGGCAAGC TTCTGGATAG GGCCAGGCCG GTGGTGGTAA TGTTCCTAGG GCCGAATGGG
TACGGCAAGA CGACCACTCT CGCCAAGCTT GCATACCACC TAATGGAGAG GGGGTACACC
GTCGTGGGGG CCGCGGCCGA CACTTTCAGG GCGGGCGCTA GGGAGCAGTT AGAGGAGCAT
GGGAGGCGGG TTGGGTTCAA GGTCATCGGG GGGCCATATG GGGCTGATCC AGCCTCGGTG
GCCTTCGACG CCGTGCAACA CGCCAGGTCT AGGGGCCACC ACTTCGTCCT CATCGACACG
GCGGGGAGAA TGCATACCGA TGCCAACTTG ATGGAGGAGC TTCGGAAGAT TCAACGGGTG
GCGGAGCCGC ACTTCTCCAT CTTTGTCTTT GACGCGCAGC TGGGGAACGA GGCGCTAGAG
ATTGCGCGCT ACTACTCGAA ATACGTCAGA ATAGACGGGA TGATTGCGAC GAAGGTCGAC
GCATACCCCA AGGGCGGCTC TATTCTCACC TTTATGTATA CTCTGAAGCG GCCAGTGTAT
TTCCTCGGTG TTGGACAAAG CTACAAAGAC CTTGTAAAAT TCGTCAAGCT GGACTACGTG
AAGCAGTTGG TGGAGTAG
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| Protein sequence | MFDRLKRTFS KFVNAVVSAV TEDTLGEKEV EEFVTDLYLE LVESDVAVEV ADALVEELKR
RLVGLKVPRF GDKEGAVKRA VVDSVLQILS DVPDVDFYEE GGKLLDRARP VVVMFLGPNG
YGKTTTLAKL AYHLMERGYT VVGAAADTFR AGAREQLEEH GRRVGFKVIG GPYGADPASV
AFDAVQHARS RGHHFVLIDT AGRMHTDANL MEELRKIQRV AEPHFSIFVF DAQLGNEALE
IARYYSKYVR IDGMIATKVD AYPKGGSILT FMYTLKRPVY FLGVGQSYKD LVKFVKLDYV
KQLVE
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