Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_1826 |
Symbol | |
ID | 4910210 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | + |
Start bp | 1691940 |
End bp | 1692605 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640125576 |
Product | translation initiation factor IF-6 |
Protein accession | YP_001056709 |
Protein GI | 126460431 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1976] Translation initiation factor 6 (eIF-6) |
TIGRFAM ID | [TIGR00323] translation initiation factor eIF-6, putative |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.644834 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGTTCG ACATCTCCCC CGCCAGGCTG TTCGGCTCGT CGTCCGTCGG AGTATTCCTA GCCACTAACA ATACCGTCAC CTTTGTGCCG CCTGACACCC CCGAGAAAAT AGACGATTTG GTGCGCAACA CCCTCCGCAC AACGGTGGCC AAGTTCACCA TAGCCAAGTC GCCCCTCCTT GGCATATTCA CCGTAGTAAA CGACAACGGA GTCCTCCTCT CCCCGCTGGC CCTCGAGGAA GAGGTCAAGC TCTTTAAGTC CCTTGGGCTA AACGTGGGCA TCGTGGCCAC GAAGTACACA GCGGTGTCCA ACCTCGTGCT TGCAAACAAC AGGGCGGCTC TGGTGTCCCC CCTCCTGGAG CCTCAGGCGC GTAAGACCGT GTCCGACGTG CTCGGAGTCG AGGTGGTGGT AGACACAATA GCAGGAAATC CGCTGGTGGG GTCACTCGCA GTCGTCAACT CCCGTGGCTT GTTAGTGGCC CCCGAGGCCA CAGACGACGA CCTGAAGAAG CTGGCCGACT ACTTCAAGGT CAAGGTAGAC GTAGGCACAG TGAACAAGGG CAAGAGCTTC CTGAGAGGGG GGCTTGTGGT CAACGACTAC GGGGCCCTTG TGGGCGACGA GACGGCTGGC CCTGAACTGA TGAGGATTAC TCAAGTACTT GGCTAG
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Protein sequence | MKFDISPARL FGSSSVGVFL ATNNTVTFVP PDTPEKIDDL VRNTLRTTVA KFTIAKSPLL GIFTVVNDNG VLLSPLALEE EVKLFKSLGL NVGIVATKYT AVSNLVLANN RAALVSPLLE PQARKTVSDV LGVEVVVDTI AGNPLVGSLA VVNSRGLLVA PEATDDDLKK LADYFKVKVD VGTVNKGKSF LRGGLVVNDY GALVGDETAG PELMRITQVL G
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