Gene Pcal_1825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1825 
Symbol 
ID4909538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1691668 
End bp1691943 
Gene Length276 bp 
Protein Length91 aa 
Translation table11 
GC content55% 
IMG OID640125575 
Product50S ribosomal protein L31e 
Protein accessionYP_001056708 
Protein GI126460430 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2097] Ribosomal protein L31E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.957131 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCTGAGG AAAAGAAGGT AGTCTTGACG AGGGAGTATG TAATAAACCT GAGGAGGACT 
CGCGAGGTGT CGAGAACCAA GAGGGCTAAG TACGCCGTGG GCCTCATAAG GCGGTTTGTT
GCACGCCACC TAAAAGTGGA GCCCAAGGCC GTCAAGCTAG GCCAGGCGCT CAACGAGGCT
CTCTGGGCCC GTAGCATTGA GAAACCCCCC AGGAGAGTAC ATGTTGTGGT AGAAAAGCTA
GACGACGGAA CTGTCCGCGT GGAGTTGAAA CAGTGA
 
Protein sequence
MSEEKKVVLT REYVINLRRT REVSRTKRAK YAVGLIRRFV ARHLKVEPKA VKLGQALNEA 
LWARSIEKPP RRVHVVVEKL DDGTVRVELK Q