| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1823 |
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| Symbol | |
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| ID | 4910135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1689938 |
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| End bp | 1690696 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640125573 |
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| Product | HhH-GPD family protein |
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| Protein accession | YP_001056706 |
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| Protein GI | 126460428 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0177] Predicted EndoIII-related endonuclease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTGCC TAGACCTCAC CCTCTACCCC AGCCTAGTCC TCGCCCTACT TGACGGCAAT
TATGTGAAAA AATTCGGCGT GAAAAAGGGC GTCTGGGCGG GCGACGATAT ATACATGTCG
GGCCGCTGGT ATTCGCCTTG GCGCTATGTA AACGAGGTGG ATAGGGCTGC GGCCGACTAC
ATACAGCCCC TCTTGGAGGA GTACGGAGAC TGCGTAGGCA TATCCACATC CCCCGGGGAC
GAGGACCTGC TCTTCGTAGT GGCCTTCCTA ACCCAGAACA CTAACTACCA CGTGAACGTG
CTGAGGTGGG CCAACGCGCT GTTTTCAAAG AGCGAGGACA TCCGCGCCGC GGCGGCGAAT
GCCCCCAAAG TGGGGAGAAG CTACCAGTTG GCCAAGCTCC CAGATGCGGT GGCAGACTAC
ATACGCCTGG GAAAGCCCAA GGATAGGCCC ACTCTGCTAA AAATCAAGGG GGTAGGCCCC
AAAGTCGCCG ACCTCTACCT CCTCTACACG GGGGACGCAA CAGCCGCCCC AGTGGATAAA
CACTTCACGA GAATAGCGCC GAGGCTTGGC CTCAAGGGGG AGCCGCCGCG CGCCGAGTAT
TGCAGGCGTT ATGAATGCGG CAACTGCCCC CTGGCGGACA GATGCCTACG GTACAGAGCC
TACGCGGCCT TCGGCAGATT GGCGGGGTGG GTGCAGACGA TGAGCTACTT AATCGACAAG
GGGCTGGCCG CCCCGACACG CGGCGCCCCG AGGCGTTGA
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| Protein sequence | MNCLDLTLYP SLVLALLDGN YVKKFGVKKG VWAGDDIYMS GRWYSPWRYV NEVDRAAADY
IQPLLEEYGD CVGISTSPGD EDLLFVVAFL TQNTNYHVNV LRWANALFSK SEDIRAAAAN
APKVGRSYQL AKLPDAVADY IRLGKPKDRP TLLKIKGVGP KVADLYLLYT GDATAAPVDK
HFTRIAPRLG LKGEPPRAEY CRRYECGNCP LADRCLRYRA YAAFGRLAGW VQTMSYLIDK
GLAAPTRGAP RR
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