Gene Pcal_1819 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1819 
Symbol 
ID4910128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand- 
Start bp1687012 
End bp1687683 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content55% 
IMG OID640125568 
Producthypothetical protein 
Protein accessionYP_001056702 
Protein GI126460424 
COG category[R] General function prediction only 
COG ID[COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTTTA AGTTTGGGAA TCTCGAGATA TCTTGGCTTG GCCATGATGG GTTTAGGATT 
GTGGGGGGCG GCGTAGTTGT GTATATTGAC CCGTTTCAGC TACAGGTGGG GGAGCCCAAG 
GCGGACTTTA TCCTCGTCAC GCATGAGCAT TTTGACCACT GTGACCCGCC TTCTATTCAG 
CGCGTCTTGA AGCCTTCTAC GAGGGTGGTG GCGCCGCGGG TGGCTAAGGC CTGTGTGAGT 
AAGGCCGCTC AGAACGTGGT AGAGATTTCG CCGGGGGCGT CTATCGACTT GGGTCCGCTG 
AGGGTGACCG CCTACCCCGC CTACAACATA AACAAGTTTA GAGACCCGGC GCGTGGCGTC 
GTGTTTCACC CTAGGGAGGA TGGGAGAGTG GCGTATCTCA TTGAGTGGGG CGGCGTGAGG 
ATTTTCCACG CCGGGGATAG CGACTTTGTG CCAGAGTTTA GAGACGTGAA GGCCGACGTT 
GTGTTAGTTC CAGTTTCTGG GGTTTATGTA ATGACGGCGC GAGAGGCCGC CGAGTTTATA 
AATACAATAA GGCCGAGGGT GGCAATTCCC ATGCACTACG GCGCCATTGT TGGGTCGAGG 
AGAGACGCAG AGGAGTTCAA GTCGCTTGTG GGGCCTGGAG TTGAAGTAGT TGTCTTAGAG 
CGGGAAATAT AG
 
Protein sequence
MPFKFGNLEI SWLGHDGFRI VGGGVVVYID PFQLQVGEPK ADFILVTHEH FDHCDPPSIQ 
RVLKPSTRVV APRVAKACVS KAAQNVVEIS PGASIDLGPL RVTAYPAYNI NKFRDPARGV 
VFHPREDGRV AYLIEWGGVR IFHAGDSDFV PEFRDVKADV VLVPVSGVYV MTAREAAEFI 
NTIRPRVAIP MHYGAIVGSR RDAEEFKSLV GPGVEVVVLE REI