| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1809 |
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| Symbol | |
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| ID | 4909482 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1678654 |
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| End bp | 1680864 |
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| Gene Length | 2211 bp |
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| Protein Length | 736 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640125558 |
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| Product | AAA family ATPase, CDC48 subfamily protein |
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| Protein accession | YP_001056692 |
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| Protein GI | 126460414 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0464] ATPases of the AAA+ class |
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| TIGRFAM ID | [TIGR01242] 26S proteasome subunit P45 family
[TIGR01243] AAA family ATPase, CDC48 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTAGCG AGGTCATTCT AAAGGTAGCT GAGGCTAGGT CACGCGACGT TGGCCGAAGC
ATTGTGAGAC TCCCCGTGAG AATAATGAGG AAGCTGGGGG TAGAGCCCGG GGACTACGTG
GAGGTTATTG GGAGGAAGTC GGCCTATGCG CAAGTGTGGC CCGCCTACCC CGAGGACGAG
GATAAGGAGA TTATACGCAT GGACGGCATC ATTAGGCAAA ACGCAGGCGT TGGCATAGGC
GACACGGTGA AGGTGCGTAA GGTGCAGTTA AAGCCAGCCC AGAGGGTCGT CCTAGCGCCA
ACAGAGCCTG TGAGAGTAGA CCCCGAGTAC CTAAAGAAGC AAGTGCTACT TGGGAAACCA
ATAGCGCGGG GCCAAGCCAT CGATGTGCCC TTCTACGGCG GTGCCATAAG ATTTGTAGTT
GTGCAGGTAC AGCCGGGGCC AGCCGCTTAC GTCTCCATAG ACACAGAGGT TACGGTGAGA
GAGGAGCCTG TAAAAGAGGC CGAGCTCACA ATACCCAAGG TCACTTGGGA GGATATTGGT
GATTTGGAGG ATGCTAAGCA GAAGATTAGG GAGCTTGTGG AGCTTCCTCT TCGGCATCCT
GAGCTTTTTA AGCACTTGGG GATTGAGCCG CCTAAGGGCA TTCTGCTGAT TGGGCCTCCT
GGCACTGGGA AGACGCTTTT GGCCAAGGCC GTGGCCAACG AGGCTAACGC CTACTTCGTG
GCCATTAACG GGCCTGAGAT TATGTCCAAA TACTACGGCG AGTCTGAGGC TAGGCTGAGA
GAGATCTTCG AAGAGGCTAA GAAGAACGCC CCCGCAATCA TCTTCATAGA CGAGATCGAC
GCCATAGCGC CCAAGAGAGA GGAGGTGACC GGCGAAGTGG AGAAGAGAGT AGTGGCACAG
CTCCTCACCC TAATGGACGG ACTACAAGAA AGAGGACAGG TAATAGTCAT AGGAGCCACA
AACCGCCCAG ACGCAGTAGA CCCAGCGTTG AGAAGACCGG GAAGATTCGA CAGAGAGATC
CACATACCTA TGCCGGACAA GAGGGCTAGG AGGGAGATAT TGGCGGTGCA CACTAGGAAT
ATGCCTCTCT GTACCAAGGC CGATGTAGAA AGCGGCGTGT GCAAGCCCGG CGACGAGGTG
GATTTAGATA AAATAGCCGA GATGACGCAC GGCTACACTG GCGCAGATAT AGCGGCGTTG
GCAAAGGAGG CGGCCATGAG CGCGTTGAGG AGGGCTATTG AAAACCGCTT GATAAACGTG
GACCAAGACG TAATTCCACA GGAGACGCTC AGCAAGCTGA AGGTGGGAAT GTCGGACTTC
TTAAACGCCA TGAAGTACGT GCACCCGACG GTGCTGAGAG AGGTGATAAT CGAAGTGCCA
GAGGTCCACT GGGACGACAT AGGGGGATAC GACTCAATTA AGCAGGAGCT CAGGGAGATA
GTGGAGTGGC CCATGAAGTA TAGACACTAC TTCGACGAGC TGGGCGTAGA GCCCCCCAAG
GGCATACTGT TGTTCGGCCC ACCCGGCGTT GGAAAAACCC TATTCGCCAA GGCGGTGGCT
ACCGAGTCTG GGGCCAACTT CATAGCGGTG AGGGGGCCAG AGCTGTTGTC CAAGTGGGTC
GGCGAGTCGG AGAAGGCCGT CCGCGAGGTG TTTAAAAAGG CCAGGATGGC CGCGCCTTGC
GTCATCTTCT TCGACGAGAT AGACTCAATA GCGCCTGCCA GAGGCACGCG CCTCGGCGAC
TCTGGCGTGA CGGACAGGAT CGTAAACCAG CTCCTCGCCG AGATGGACGG CATAGGCACT
CTGAAAAACG TGGTAGTCAT GGCGGCCACC AATAGGCCCG ACATATTAGA CCCCGCGTTG
CTGAGGCCCG GCAGATTTGA CAGAGTGATA TACGTCCCGC CGCCCGACTT CAAGGCCAGG
GTAGAGATCT TCAAGGTTCA CACGAAGAAG ATAAAGCTGG CCGACGACGT CAACATAGAG
GAGCTCGCCA AGAGGACTGA GGGCTACACT GGCGCAGACA TAGCGGCGTT AGTGAGAGAG
GCGGCCATGC TCGCCCTCCG GGAAGTCATC AGAGAGGGCA AAGTGAAGCC CGTCTCAATG
AGGCACTTTG AGGAGGCCCT AAAGCGGGTG CCGCCGTCTC TCACACCTGA GGACATAAGG
CGGTACGAGG AAATGGCAAA GAGAGTTAGG AGAACAATCG CCGGCCTCTA G
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| Protein sequence | MSSEVILKVA EARSRDVGRS IVRLPVRIMR KLGVEPGDYV EVIGRKSAYA QVWPAYPEDE
DKEIIRMDGI IRQNAGVGIG DTVKVRKVQL KPAQRVVLAP TEPVRVDPEY LKKQVLLGKP
IARGQAIDVP FYGGAIRFVV VQVQPGPAAY VSIDTEVTVR EEPVKEAELT IPKVTWEDIG
DLEDAKQKIR ELVELPLRHP ELFKHLGIEP PKGILLIGPP GTGKTLLAKA VANEANAYFV
AINGPEIMSK YYGESEARLR EIFEEAKKNA PAIIFIDEID AIAPKREEVT GEVEKRVVAQ
LLTLMDGLQE RGQVIVIGAT NRPDAVDPAL RRPGRFDREI HIPMPDKRAR REILAVHTRN
MPLCTKADVE SGVCKPGDEV DLDKIAEMTH GYTGADIAAL AKEAAMSALR RAIENRLINV
DQDVIPQETL SKLKVGMSDF LNAMKYVHPT VLREVIIEVP EVHWDDIGGY DSIKQELREI
VEWPMKYRHY FDELGVEPPK GILLFGPPGV GKTLFAKAVA TESGANFIAV RGPELLSKWV
GESEKAVREV FKKARMAAPC VIFFDEIDSI APARGTRLGD SGVTDRIVNQ LLAEMDGIGT
LKNVVVMAAT NRPDILDPAL LRPGRFDRVI YVPPPDFKAR VEIFKVHTKK IKLADDVNIE
ELAKRTEGYT GADIAALVRE AAMLALREVI REGKVKPVSM RHFEEALKRV PPSLTPEDIR
RYEEMAKRVR RTIAGL
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