| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1776 |
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| Symbol | |
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| ID | 4910282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1647705 |
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| End bp | 1648160 |
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| Gene Length | 456 bp |
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| Protein Length | 151 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640125525 |
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| Product | aspartate carbamoyltransferase regulatory subunit |
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| Protein accession | YP_001056659 |
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| Protein GI | 126460381 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1781] Aspartate carbamoyltransferase, regulatory subunit |
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| TIGRFAM ID | [TIGR00240] aspartate carbamoyltransferase, regulatory subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000000334817 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | GTGTCTAAGG AGCTCATAGT GAGTAAAATT GAGAACGGCA CAGTGATAGA CCACATACCC
GCTGGCAGGG CTTTGATGGT TTTGCGGGTC TTGGGGATAA CTGGGAGGGA GGGGTTGCGC
ATCGCCCTTG TGATGAACGT GGATTCGCGC AAGCTTGGTA AGAAGGACAT CGTCAAAATT
GAGGGGCGGG AGTTGACGCC AGAGGAAGTG AATATAATCT CGGCGGTAGC GCCAACCGCC
ACTATAAACA TTGTGAAGAA TTTCGAGGTG ATTAAGAAGT TCAAGGTGTC GCCCCCCGAG
GTGATAAGGG GGAGATTCAA GTGCCGCAAC CCCATGTGTA TAACAAATGC GCCTAGGGAG
CCCGTGGTCC CCACGTTTTA CCTCGTGAAG AGAGAGCCTC CCCTCTTTGT ATGCGCATAC
TGTGGCCGAT ATCACGAGCT TAGCGACTTG ATATGA
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| Protein sequence | MSKELIVSKI ENGTVIDHIP AGRALMVLRV LGITGREGLR IALVMNVDSR KLGKKDIVKI
EGRELTPEEV NIISAVAPTA TINIVKNFEV IKKFKVSPPE VIRGRFKCRN PMCITNAPRE
PVVPTFYLVK REPPLFVCAY CGRYHELSDL I
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