| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1775 |
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| Symbol | |
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| ID | 4909488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1645915 |
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| End bp | 1647216 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640125522 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_001056658 |
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| Protein GI | 126460380 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000000602209 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGCGTCCA AAACTCTCTA CATAGCAATT GTCGTTGTTG TAATATTGCT GGCCGCCGTG
GCGGCGCTTC TGCTAATGGG AGGAGGCCAA CAGCCGCCTA CTCAAACAAC AACCGTCCAA
CCCACCCAAA CTACCAGCCA AAAGGTGTTT AAACTTGGGG CCCTACTGCC TCTCACAGGC
GGCTTCAGTA GCTATGCAAA ACTTGCACAA TGCGCTGCGC AACTCGCAAT CGACGATCTA
AATGCCGAGT ATGGGAGCAA GGGCATAAAG TTTGAACTAT ACGTGGAAGA CACGCAACTT
GATCCAAACA TCGCACTACA GAAGTTACAG TCGCTGTACG CAAGAGGCGT GAGGGCGGTA
CATGCGGGGT TGACCAGCAG AGAGGCGTCA GGCGAGAAGC CCTTCGCAGA TCAAAACAAG
ATCATACTAT TCAGCGCGTG GTCTACCTCA AGCCTCCTAG CCATACCCAA CGACTGGCTA
TATAGAATAG TTGGGACAGA TGCGAAGCAA ATAAAGGCCA TCGGCGCTAT TATAAAGCAA
CTGGGCGTAA AAAACGTCGC AATAATCTAT AGAAAGGACA CATACGGCGA GGGGCTATAC
CTAGAGTTAC AGAAGGAGGC AAAAGCACGT GGATTTAACT TAGTAGCCGC CGCGTCGTAC
GACCCAGACC CCAAAGTTTT TCCACAAGCA GCGCCAGAGG CCGTGAGGTC AATCTCCTCT
AAGGTAAAAG ACCTAGTGGG GCCGGACTTT GCACTAGTAA TAGTGTCTTT TGAAGACGAC
GGCTCCGTCG TATTAAAAGC CATAGGCCAA GACCCAGTTC TCTCAAAGGC CAGACTCATA
GGAACAGAGG GCATGGCGTT CTCCCCCATC TTGCTCAAGG AGGCGGGAGA CGTCATGGCC
AACGGCAAAA TCATAGGGAC AACCAACTGG GCCTTACCCA CGACCCCAGA GTACCAAGAC
TTCTACAAGA AGTTCAAAGC CAAGTGCGGC GCCGAGCCCA TAACCCCCGC GCCCCAGTCA
TACGACATAA TCAAAATGCT AGGCGAAATA ATGGCCACAA TAGGCACAGA CGACCCAGAC
AAGGTACGCG CCACGCTCGA GCAGTGGGGC AAAGAAGGCA GATATAAGGG AGCCACAGGC
GTAGTGCTAC TAGACGAAAA CGGCGATAGG GCAAACCCCA ATTTCCTACT ATGGGGAGTC
ACGTCGAAAA ACGGCACACT TACCTACATA GAAGTAGGCT ACTACGACTA TGACAAAGAC
ACCATAACAT TTACACAAGA GGGACAACAA TACTTTAAAT AA
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| Protein sequence | MASKTLYIAI VVVVILLAAV AALLLMGGGQ QPPTQTTTVQ PTQTTSQKVF KLGALLPLTG
GFSSYAKLAQ CAAQLAIDDL NAEYGSKGIK FELYVEDTQL DPNIALQKLQ SLYARGVRAV
HAGLTSREAS GEKPFADQNK IILFSAWSTS SLLAIPNDWL YRIVGTDAKQ IKAIGAIIKQ
LGVKNVAIIY RKDTYGEGLY LELQKEAKAR GFNLVAAASY DPDPKVFPQA APEAVRSISS
KVKDLVGPDF ALVIVSFEDD GSVVLKAIGQ DPVLSKARLI GTEGMAFSPI LLKEAGDVMA
NGKIIGTTNW ALPTTPEYQD FYKKFKAKCG AEPITPAPQS YDIIKMLGEI MATIGTDDPD
KVRATLEQWG KEGRYKGATG VVLLDENGDR ANPNFLLWGV TSKNGTLTYI EVGYYDYDKD
TITFTQEGQQ YFK
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