| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1770 |
|---|
| Symbol | |
|---|
| ID | 4909845 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum calidifontis JCM 11548 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009073 |
|---|
| Strand | + |
|---|
| Start bp | 1641978 |
|---|
| End bp | 1642871 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640125517 |
|---|
| Product | 2-ketoisovalerate ferredoxin oxidoreductase subunit beta |
|---|
| Protein accession | YP_001056653 |
|---|
| Protein GI | 126460375 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.000000266099 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTTTA GACTAGACCT TCTGCCAAAG AAAAAGTACG TAGTTCCTGG CAACGCCGCT
TGTGCAGGCT GTGGAATGAT GATAGGGCTC AAGATATTGG GCATGGCGCT GGGGGAGGAG
TCTGTCCTAG TTATACCGGC CTCGTGCGCC TCTGTTGTAC AAGGCCTTGC GCCTAAGTCG
GGCGTGGCAA TGCCGATTTT AAATGTCCCA TTTGCCTCCT CTCCAGCCGT CGCGACGGGG
ATCTCAGAGG CGTTTAAAAT GCTCGGCGTG AAGGGCCACG CCGTGGTGTG GGCCGGCGAC
GGCGGGACTG CTGATATCGG CTTTGCCGCA CTAAGCGGCG CCGCTGAGAG GAATAGTAAT
ATCATCTACA TAATGTACGA CAACGAGGCG TACATGAATA CTGGGATACA ACGGAGTAGC
TCTACCCCCC GCACAGCGTG GACTACTACA ACGCCTGCTG GAAAACGTGA ACGCAAGAAA
GATGTGGCGC TTCTCATGGC CATGCACGGG GTGCCCTATG TTGCAACAGC CAATATAGCG
TACCCCCAGG ACTTCTATAG AAAGCTTAAG AGAGCCGCGG AAATCCAGGG CTTCAAATTT
ATACATTTGT ACACGCCGTG TCCTCCGGGT TGGCGTTTTG ACCCCGCTAA GACGGTGGAG
GTGGCTAGAC TCGCCGTGGA GACTGGCGCG TGGATTTTGT GGGAGTACGA CAACGGCGTA
TTTAAGCTGA ATCCCCCCAG CACAGTATAC GCAGATAAGT CAAAGAGGAG GCCCCTTAAA
GACTACTTGA AGCTACAGGG GCGCTTCGCC CATTTGACAG AGGAGGAGAT AAAGGCCTTA
GAGGAGGAGG TAGACGCCAA GTGGAACACG ATATTAAAGC TCGCTAAGCT GTAG
|
|---|
| Protein sequence | MSFRLDLLPK KKYVVPGNAA CAGCGMMIGL KILGMALGEE SVLVIPASCA SVVQGLAPKS
GVAMPILNVP FASSPAVATG ISEAFKMLGV KGHAVVWAGD GGTADIGFAA LSGAAERNSN
IIYIMYDNEA YMNTGIQRSS STPRTAWTTT TPAGKRERKK DVALLMAMHG VPYVATANIA
YPQDFYRKLK RAAEIQGFKF IHLYTPCPPG WRFDPAKTVE VARLAVETGA WILWEYDNGV
FKLNPPSTVY ADKSKRRPLK DYLKLQGRFA HLTEEEIKAL EEEVDAKWNT ILKLAKL
|
|---|
| |