Gene Pcal_1768 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1768 
Symbol 
ID4909503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1640582 
End bp1640833 
Gene Length252 bp 
Protein Length83 aa 
Translation table11 
GC content52% 
IMG OID640125515 
Productpyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit 
Protein accessionYP_001056651 
Protein GI126460373 
COG category[C] Energy production and conversion 
COG ID[COG1144] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, delta subunit 
TIGRFAM ID[TIGR02179] 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000010158 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGTTGCCGA TCTCAACTCC TTCAACAGCG TCGGCGGGTG TGACAGGCAC TTGGCGTACC 
TATAAGCCCG TGGTGAATTT ACAGAAGTGT ATAGACTGTG GACTCTGCTG GCTGTACTGC
CCCGAGTCTG TAATCGACTG GGAGAAGGGC CAGAAGGTGA CTATTGATTA CACGTTCTGC
AAAGGGTGTG GCATATGTGC AGACGTATGT CCCGTAAAGG CCATAGACAT GGTCCCAGAA
GGTGAACTAT GA
 
Protein sequence
MLPISTPSTA SAGVTGTWRT YKPVVNLQKC IDCGLCWLYC PESVIDWEKG QKVTIDYTFC 
KGCGICADVC PVKAIDMVPE GEL