Gene Pcal_1760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1760 
Symbol 
ID4909216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1634579 
End bp1635106 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content51% 
IMG OID640125507 
Productputative NTPase 
Protein accessionYP_001056643 
Protein GI126460365 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1618] Predicted nucleotide kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000221157 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGTGGC GTGAAAGGGC TGAGAAATTA CTCATTGGGA TTAGTGGAAT GCCCGGCGTG 
GGAAAAACGA CGCTAGTACT AAGAGTGTTA GAACTGGCGC GGAGTAAATA TCGCTGCTGC
GGCTTTGTGA CGGTAGAAGT AAGAGAACGG GGCGTGCGAA TAGGATTTGA CACAATCGAC
GTGGTAAGCG GCGCAAGAGT CCCCCTAGCT AGAGTGGGCA CCGGAAGTCC CTCGGTGGGG
AAGTACGTGG TCAACCTCCC CAGTTGTGAA GTTATAAGCC GCGCATTACG GCAAGAGGAC
TGCGAAGTGG CCTTCATAGA CGAGATAGGG GCCATGGAGT TCAAGTGCCC AACTTTTTAC
ACAGACCTCC GCGTGGCAGT GGACAGAATT CCAAGGATAA TAGCCACAGT ACATAGGAAC
TATATACATA CAGCGGAGAA GTTAGGCTTT GAGATTATTT GGCTTACACG GGAAAACTGG
AACTCGACGC TAAGCACGGT GCTCAAAGCT CTTTCTCTAT CTACCTAG
 
Protein sequence
MTWRERAEKL LIGISGMPGV GKTTLVLRVL ELARSKYRCC GFVTVEVRER GVRIGFDTID 
VVSGARVPLA RVGTGSPSVG KYVVNLPSCE VISRALRQED CEVAFIDEIG AMEFKCPTFY
TDLRVAVDRI PRIIATVHRN YIHTAEKLGF EIIWLTRENW NSTLSTVLKA LSLST