Gene Pcal_1750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1750 
Symbol 
ID4909209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1627791 
End bp1628102 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content45% 
IMG OID640125497 
Producthypothetical protein 
Protein accessionYP_001056633 
Protein GI126460355 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00598357 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTGCGACC TCTATTGGCA ACTCTATGAC AGAGGAATTC CCGTGCTGAG TGGGCCTTCT 
ACATACGCCA AATTGTTGGG ATGCCCCACC ACTTGTGACT GCGATGTGGT GATACACGTA
AATGACTTAG AGAGAGTTGG CGCCGGAGAC TGTGTGTGGG TTATTGACGA TCCTAGCTTT
GTACATCGAT ATGTGTGGAT AAGAGGACTT CCGCATATAG ACATACATGA AATCGGCAAA
ATTAGAGGGG GAAATTTAGA TGTGGTAAAT TGTATAATGG ATAAGCTTAG AAGTGCAACT
CGTGCACGAT GA
 
Protein sequence
MCDLYWQLYD RGIPVLSGPS TYAKLLGCPT TCDCDVVIHV NDLERVGAGD CVWVIDDPSF 
VHRYVWIRGL PHIDIHEIGK IRGGNLDVVN CIMDKLRSAT RAR