| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1747 |
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| Symbol | |
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| ID | 4909362 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1625071 |
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| End bp | 1625784 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640125494 |
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| Product | 30S ribosomal protein S4e |
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| Protein accession | YP_001056630 |
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| Protein GI | 126460352 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1471] Ribosomal protein S4E |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.015598 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTCATC TTAGAAAGTC GCTGGCGCCA TATTGGTGGC CAATACCCAG AAAAGCCGGT
GGAGTCTGGG CCGTAAGGCC ATCAACGGGG CCACATAGTT TGGAATACTC TCTTCCGTTG
GCAGTTGTAG TAAGGGATGT ACTGCGATAT GCAAAAACGC TACGCGAGGC GAGGTACATA
ATTTCGAGAG GGTACATAAA GGTAGACGGG GTCGTAAGAA AAGACTATAA ATTCCCCATA
GGGCTCATGG ACGTAGTTGA AATAGTGCCA ACTGGCGAGA TTTATAGAGT GGTGCCAGAC
GAGGCCAAGT ACTACGACTT GAAACCCATA CCGTCCAGCG AGGCGGCTCT AAAGCCGCTA
CGTGTAGAAG GTAAAACCGC CGTAAGCGGC GGCAGAATTC AGCTACACTT TCACGACGGC
CGCAACCTGA TACTACCGCC CGACGTAGGC CGCCAGATAA AGACCTTTGA CACTGTGGTG
TACGATTTGG AAAACAAGGC GATTAAGACT CATTTGCCGC TGAGGCTGGG CCAGCTCGCC
GTAGTAACTC ACGGTGGCAA CATAGGATTT GTGGGCCAGT TTTTTGAAGT GGTGTGGACG
CTTAAAAGAC GTCAATCCGT TGTGGCTCTT AGAAAAGGCG AGGAGGTAAG AAGAACGATC
TTAGACTACA TAATGGTGAT TGGGACAGAA GCCCCAGTAG TAAAAATAAG CTAA
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| Protein sequence | MVHLRKSLAP YWWPIPRKAG GVWAVRPSTG PHSLEYSLPL AVVVRDVLRY AKTLREARYI
ISRGYIKVDG VVRKDYKFPI GLMDVVEIVP TGEIYRVVPD EAKYYDLKPI PSSEAALKPL
RVEGKTAVSG GRIQLHFHDG RNLILPPDVG RQIKTFDTVV YDLENKAIKT HLPLRLGQLA
VVTHGGNIGF VGQFFEVVWT LKRRQSVVAL RKGEEVRRTI LDYIMVIGTE APVVKIS
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