Gene Pcal_1746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1746 
Symbol 
ID4909377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1624643 
End bp1625074 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content52% 
IMG OID640125493 
Producthypothetical protein 
Protein accessionYP_001056629 
Protein GI126460351 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0138732 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTG AGCGAAGCGG CCAGCCGGTA ACCGCATTGC TAAGGCTTTT AGAAGAGGAC 
TTAAAACGCG ACGACGTAAT TTACGTCGAG CGCGTCCCAG CTCCAAGAGC GGGGGAGCGC
TATAGGGAGG TAGTCTCCAA GTTCTTCACG GAGTTTGGAG TTGCCACAGT GTACATAAGG
GTAAGAACGG CAACGTTTGA GCGTAGATAT GTGATATCTG CGAAATTTGA CTGGGTGTCT
GGCGGAATCG TGGAAGGGTG GGTCGTGGAA GGCAACGTGG TCAAGATTTA CGAGCCTATA
GCCGTGAGCG CCCCAGATAT TGAGAAGACA CTTGACTACT ACGGCGACAT TTTCTGGAAG
ACAGAGGAGA AGCTCCTCTC GAAAAAGATG GCGCAGACCT ACGTCGAAGA ACAACAGCCG
CCAGCGGATT AG
 
Protein sequence
MKIERSGQPV TALLRLLEED LKRDDVIYVE RVPAPRAGER YREVVSKFFT EFGVATVYIR 
VRTATFERRY VISAKFDWVS GGIVEGWVVE GNVVKIYEPI AVSAPDIEKT LDYYGDIFWK
TEEKLLSKKM AQTYVEEQQP PAD