Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_1741 |
Symbol | |
ID | 4908280 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | - |
Start bp | 1619971 |
End bp | 1620891 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640125488 |
Product | D-3-phosphoglycerate dehydrogenase |
Protein accession | YP_001056624 |
Protein GI | 126460346 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.177612 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGGCTC TAATAGCCGA TGCCGTAGAC CCGTTAATAG TAGAGCGGCT AAAGAAGATG GGCATAAGGG CCGATGTGAA ACCCGGCATT TCGAGAGAGG AGTTGTTAAA AGTGGTGGGA GACTACAACA TTTTAATCTT CAGGGGCAGG CTCAAGATAG ACAAAGAGGT AATAGACGCC GGTAGGAACC TAAAGATTCT GGCCAGGTAC GGCGTTGGGT TAGACAACGT CGACGTAGAA TACGCAGTGA AGAGAGGAAT CTCTGTGGTG AATGCACCAA ACGCGCCAGC TAGAAGCGTG GCGGAGCTCA CAATAGGGCT AATGTTCGCA GTAGCGAGGC GGATACCCCT CCTCAGCACA AAGGTAAAGG CAGGGGAGTG GCCCAAGGGC AAATATGTGG GCATAGAGTT ATTTGGAAAA ACGCTCGGCG TGGTTGGATT TGGTCGTATT GGGAAAGCTG TGGCGCAAGC GGCGAGGGGG CTTGGCATGG ATATACTGGC CTACGACGTT ATAGACGTCA AAGACGAGGT GGAGAAAATA GGCGGCAGAC AAGTGAGCTT AGAGGAGCTT TTAAGGAGAA GCGACGTAAT ATCGCTCCAC GTCCCGCTCA CCCCGGCCAC GTACAGACTG TTAAACGACG AAAGATTGGC ATTGGTAAAA GATGGGGCAA TAATAATAAA CACTAGCAGA GGCGAGGTAA TAGATCACGA GGCCCTCCTA AAGCACTTAG ACAGGCTTTG GGGAGTTGGA CTAGACGTAT TGCCAGAGGA GCCTCCGAGG AGTGAGACGT TGCGTCAGCT CATAAGTCAC GAGAAGGTGG TGGTTACGCC GCATGTGGGG TCGGAGACCT TTGAGGCGAT GAGGCGTCTG GCAGAGGAGC TTGCGGACAA CATAGAGGAA GTTGTCAAAA GGGTGTTATG A
|
Protein sequence | MSALIADAVD PLIVERLKKM GIRADVKPGI SREELLKVVG DYNILIFRGR LKIDKEVIDA GRNLKILARY GVGLDNVDVE YAVKRGISVV NAPNAPARSV AELTIGLMFA VARRIPLLST KVKAGEWPKG KYVGIELFGK TLGVVGFGRI GKAVAQAARG LGMDILAYDV IDVKDEVEKI GGRQVSLEEL LRRSDVISLH VPLTPATYRL LNDERLALVK DGAIIINTSR GEVIDHEALL KHLDRLWGVG LDVLPEEPPR SETLRQLISH EKVVVTPHVG SETFEAMRRL AEELADNIEE VVKRVL
|
| |