| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1737 |
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| Symbol | |
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| ID | 4908145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1616487 |
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| End bp | 1617743 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640125484 |
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| Product | tRNA CCA-pyrophosphorylase |
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| Protein accession | YP_001056620 |
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| Protein GI | 126460342 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1746] tRNA nucleotidyltransferase (CCA-adding enzyme) |
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| TIGRFAM ID | [TIGR03671] CCA-adding enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.672198 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCTTGG AAGAGGTACT GGAGGAGGCG TATAAGCTCG TAACGCCGAC GCCCGAGGAG
GAGAAAAAGG TGGCCGAAGT GGCCAGCAAC GTTAAAGGTC TCGTGGCCAG GTGGGTAGAG
GAGAGGGGGG TTAGGGCAGA GGTGCAAGTG CTTGGTTCCA GCGCCCGCGG CACGTGGCTA
CCGGGCCAGA GGGACATAGA CATATTTATA GTTCTAGAGG ATAGGTCTAT TAAGCCGGAG
GAGGTTGTGG AATCTCTTTC CAAGTTTCTA GACGTGGTCG GCGTCAGCTG GGGGCTGAGG
TTTGCGCAAC ATCCCTACTT GACAGTGTTT ATAGACGGCT ACGAAGTAGA TGTAGTCCCT
TGCTACAAAA TTAGCCCAGG CGAGAGGCCT ATAACTGCCG CAGATCGGTC GCCGCTTCAC
CACCAGTTTC TTATGCAGAG AATGACTCAG CAACAGAGAC AAGACGTTAG GCTCCTCAAG
CTTTTTCTAA AGGCCATAGG GGTCTACGGG GCTGAGATAA AGGTGGAGGG CTTCTCGGGC
TACTTGGCAG AGTTGTTGGT TGTGTACTAT GGGAGTTTTC TTGACGTGTT AAAGGCGGCG
TCTAAATGGC GCCCATACCG CACCTTTATA TCTTTCCAAG AGGTTAAGAC TAAGTTCAGG
GCTCCCCTAG TCGTGGTCGA CCCAGTGGAC TCTAGTAGAA ATGCCGCAGC TGCCGTGTCT
TTAACCTCAA TGTCTACCTT TATACTTGCG GCTAGGCGCT TCCTAAAGAG GCCGTCTATG
TCGTATTTCC GTCCGACTGT TGGCAAACTT GTACAGCCTC TGCACGTCGT AGAGGTGGTG
TTTCCCTACC CAGCTGAGCC TCCCGACATA GTTTGGGGGA AGTACAAACG CTTAGGCCGC
GCGCTGTTTA ACTGGATTAG GGAATGCGGC TTCAGAGTCT ACCGCTGGGG CGTTGAAAGC
GACGAGAAAA GCTACGTATC TCTCGTGTAT GTCCTAGAGA CCGCTGTTCT ACCGCCGTAC
GTCCTCCACA AGGGGCCTCC GGTATACGAC GACGCAGTAG ATAAATTTGT AGAGAAATAC
GTGGGCGAGG ACGTGGTAGG CCCATTTGTG CAAGGTAGTA GAGTTTATGT GATCAAAAGG
CGGAAATATA CGCAGATAGC CGACTGTATC AAGGCCAAGT TGGGCGGTGG GGAATACGTC
GTAAAACTCG GCGAATATTC AGGCGAGCTG GTGCGTAAGA ACCCGTGGAT TACTTAA
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| Protein sequence | MSLEEVLEEA YKLVTPTPEE EKKVAEVASN VKGLVARWVE ERGVRAEVQV LGSSARGTWL
PGQRDIDIFI VLEDRSIKPE EVVESLSKFL DVVGVSWGLR FAQHPYLTVF IDGYEVDVVP
CYKISPGERP ITAADRSPLH HQFLMQRMTQ QQRQDVRLLK LFLKAIGVYG AEIKVEGFSG
YLAELLVVYY GSFLDVLKAA SKWRPYRTFI SFQEVKTKFR APLVVVDPVD SSRNAAAAVS
LTSMSTFILA ARRFLKRPSM SYFRPTVGKL VQPLHVVEVV FPYPAEPPDI VWGKYKRLGR
ALFNWIRECG FRVYRWGVES DEKSYVSLVY VLETAVLPPY VLHKGPPVYD DAVDKFVEKY
VGEDVVGPFV QGSRVYVIKR RKYTQIADCI KAKLGGGEYV VKLGEYSGEL VRKNPWIT
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