| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1727 |
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| Symbol | |
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| ID | 4908457 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1611087 |
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| End bp | 1611917 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640125474 |
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| Product | putative circadian clock protein, KaiC |
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| Protein accession | YP_001056610 |
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| Protein GI | 126460332 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0467] RecA-superfamily ATPases implicated in signal transduction |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.806508 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTATG CGCAGGATTA TGAGTACCAG GAGTATTACC AGTACGACAA TAGAGCTCCC
ACGGGCATTT GGTACGTCGA TCAGCTCCTC CAGGGGGGCT TTCGCAGGGG CGAGATCTAC
CTAATAGCTG GCGAGGCTGG CCAAGGCAAG ACTATATTCA GTCTGCAGTT CCTCAAGACC
GGCGCCGAAT TATACGACGA GCCTGGCCTC TACATTACCA TTGACGAGCC CTCGGAAGAC
GTCAAGAGGG GCGTCAGAGA GTCGCTGGGG TGGGACCTTG ACGCGTTAGA AAGCCAAAAC
AAGCTTGTCT TCGTTGACCT CCGCACGCAC TTTAGGACAT ACGCCAAGGA GGAGAAGGTG
TCCGCCGACC CCAGAGACAT TGCGAAAATA ATCCTGGAGT ATGTGAAAAA GTTCGGGATA
AAGAGGCTCG TCATCGACCC AATAGCCCCG CTGATTATAA CGTCTCACAC AGACGTGCTG
TGGGTAAGGG AGTACATGAG GGAGCTAGTG TTTCAGCTAA GGAAACTTAA GGACGTGACC
ACGTTGATGA CCTCGGAGAT ACCGACGGGG GAGAACAAGA TAAGCAGGTT TGGAGTTGAG
GAGTACTTGG CCAGCGGCGT GATTAAGCTG GAGCTAATGG AGTACAGAGG GTTTGTCTTT
AGAGTGATGT TCATTAGAAA GATGCGATGG ACGCCGGTAA GGCCGCAGAA GCTGGTCTTC
GAAATATACC CACACTACGG AATTTACGTT CTAGATAGGC TTGAGAACTT TATGAAACAA
GTGGACATGT GGTACGCCTC GCTTACTCAG CAACAGGCAC CGCCGGCCTA A
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| Protein sequence | MSYAQDYEYQ EYYQYDNRAP TGIWYVDQLL QGGFRRGEIY LIAGEAGQGK TIFSLQFLKT
GAELYDEPGL YITIDEPSED VKRGVRESLG WDLDALESQN KLVFVDLRTH FRTYAKEEKV
SADPRDIAKI ILEYVKKFGI KRLVIDPIAP LIITSHTDVL WVREYMRELV FQLRKLKDVT
TLMTSEIPTG ENKISRFGVE EYLASGVIKL ELMEYRGFVF RVMFIRKMRW TPVRPQKLVF
EIYPHYGIYV LDRLENFMKQ VDMWYASLTQ QQAPPA
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