Gene Pcal_1719 details

Gene Information

• Locus tag: Pcal_1719
• ID: 4909005
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pyrobaculum calidifontis JCM 11548
• Kingdom: Archaea
• Replicon accession: NC_009073
• Strand: -
• Start bp: 1601302
• End bp: 1603371
• Gene Length: 2070 bp
• Protein Length: 689 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 640125466
• Product: hypothetical protein
• Protein accession: YP_001056602
• Protein GI: 126460324

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 22
• Fosmid unclonability p-value: 0.578562
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCCACAA CGGGCGCATC CCAGTTCGCC GAGCTGGCCG CTTTGGGCTT TTTCAACCCA 
GTAGCCAAGG CCGACGTCGA TAAGGCCCTC GGCGACGTGT TGAGTGGGCT TAGGGCCGTG 
GAGGGACTGG AGGGGAGTCT GGTCGGCCAC GTCTCCAGGG GCTTTGCCTC AGCCGACTTC 
GCCCGCCTGG TCGAAGGCGC AGTGAAGGCA AACCTGGAGA CCGAGACGAA GGGCTTAATA 
AGAGCTAGAC TTATGAGCAA AGCGGCACGC GAGGTGACTC GCGACGAGGT GGACCACTTC 
ATGGCAAACG CCGCGGCGGC TGTGGAGGCC GCGCTTGGCC TCATCTATAG GGCGGTGCAC 
GAGAGGTGGA GGGCTACGGC TAGAGTTGAC GAGGCTGGGA GAAAGAACTA CGTCCACGTA 
GACAAGGAGC TCGTCGATAC ACTCGACGTG CGCAAGAAGG ACATGGTGCA CTACCTATGC 
TACGAGGTGG GCGACGTCGT GTATGGGGGC GCAAGGGCCG ATGGTGTGGT TGTGTTAGTC 
TTCCTGGGCG GAGAGAAGTC GATAAGGGTT GAGGTGTTTG CTAAGTCCAT CGCTGGCCTC 
CCAGTCCGCT TTGAGGAAGT GGAGTGGGGC GGCGAGAGGT GGCTCAGGCT GGCAACTGCA 
AAGATCCACA AACCGAGCGG TTCCGATAAG CACGTGGCAC AGGTGGAGCT TAGGCTGGCG 
AAGCTTGAAG CAGAGGTGGA CGGAGGCGCC GCCAGTGTGG AGGGCCTTAG GGGCCTACTG 
GTGTCAGATG CCTCTGGGAA AGAGATAGAA ACTCCCGATC CCCTTCTCCT CAAGCTTTTT 
GCGCACCCCT TCGAGAGGGT AGAGATTGAA GTGGCTGGGG TGTCGCACAC CGAGGCTGGC 
TTCGCTCTGA CATTCAGAGC TGTTGCTCGT GACGACAAGC CGTTTAAAGA GCTTTTTAAC 
GACATCGCCG AAAGGTACGG GAAGGAGTTA TGGTTCGTAG TGGACGAGGC CAAGGGCATG 
TGGCTAGAGG CGATGCGCAA GCTATGCGAG GACATCAAAC GCATAACAGA TAAAGCCGCT 
GAGGTGGGGA AGAGGGAAGG CGTTGAGAGT GGCAGAAAGG CCCTTGTCGA GGGTCTAAAG 
CGCCTGTTCG AGGAGAAGGA GCGGGAGGCG TTAGACGCTG GCCGTAGCGA CGAGGCTCTC 
GCAATTGCAG TGGCGGGCCG CCTCCTCATC GGCATTGTAA ATAGCCCAAG GGAGTGGCTT 
TCTCTCCTCG TGGGAGACGG CGTAGTGGAC TTCGTCCACA AGACGCTTGG CTTTTCAGCC 
AAATACACCG AGGTTGCCGA GGCAGTCCTA CGCCTCTTGG CCACGTGGGC TGGCGCGTAT 
GGGGCGAAAA TAAGGGCGAT AGGTAAGGGC GCGGTCGTAT ACGCCAGCTC CAGGGACGCG 
GTCAGGGTGC TTGGAGCAGT CCTCGCGGGC GAGGTGCTTG AGTACGCGGC GTCTCTGGCC 
AAGTCGTGGA GTGGGCTTGC CGGGTCAGAC GCGCCTAAGG TCATCTCGCT TCTGGCTCTC 
GCCCAACTCC TCGGCGTCGT TGAGGAGAGG TGGGCCGTTG AGCTGTGGTT GGCACACAAG 
GCCGTCACGA CCCCCACGCA ACCAGAGGCG GCGAAGGCCC TTGAGGGTCT CTTCGCCAGA 
GTGGAGGGTG TGGACAAGGT GGAGTGGACG AAGAGAGGCG TCAGTCTCTA CTTCAAAGTG 
AGAGGTGTGG GGGGCGCCGA GCGGGCGGCC GTGTTTAAGC TGTACACAGA CTTCCGCCAC 
TTCCTCCTCT ACTGCGAGTC GTGTAGCGAT GAGAAGTCGG CAAAGAGAGT CCTAGGCGAA 
TTGGCAGAGG AGCTTCGCCC AGCGGTGGAG CAGTTGGAGA GGCGGCTGGG GCTGGTTGCC 
AAAGAGCAAA AGTGGCCGAA GTGGAATTGG AACGCCCTTG AACTACCAGC CAGAGTGGGT 
TGGCCCATGT TTTTAAAGCT ATGGATAAAA GTACATGACC TTTCCCGTGA AGAGGGAGGG 
GAGAGAGCTT CTCCGCATGG AGGTGCTTGA 

 

Protein sequence

MATTGASQFA ELAALGFFNP VAKADVDKAL GDVLSGLRAV EGLEGSLVGH VSRGFASADF 
ARLVEGAVKA NLETETKGLI RARLMSKAAR EVTRDEVDHF MANAAAAVEA ALGLIYRAVH 
ERWRATARVD EAGRKNYVHV DKELVDTLDV RKKDMVHYLC YEVGDVVYGG ARADGVVVLV 
FLGGEKSIRV EVFAKSIAGL PVRFEEVEWG GERWLRLATA KIHKPSGSDK HVAQVELRLA 
KLEAEVDGGA ASVEGLRGLL VSDASGKEIE TPDPLLLKLF AHPFERVEIE VAGVSHTEAG 
FALTFRAVAR DDKPFKELFN DIAERYGKEL WFVVDEAKGM WLEAMRKLCE DIKRITDKAA 
EVGKREGVES GRKALVEGLK RLFEEKEREA LDAGRSDEAL AIAVAGRLLI GIVNSPREWL 
SLLVGDGVVD FVHKTLGFSA KYTEVAEAVL RLLATWAGAY GAKIRAIGKG AVVYASSRDA 
VRVLGAVLAG EVLEYAASLA KSWSGLAGSD APKVISLLAL AQLLGVVEER WAVELWLAHK 
AVTTPTQPEA AKALEGLFAR VEGVDKVEWT KRGVSLYFKV RGVGGAERAA VFKLYTDFRH 
FLLYCESCSD EKSAKRVLGE LAEELRPAVE QLERRLGLVA KEQKWPKWNW NALELPARVG 
WPMFLKLWIK VHDLSREEGG ERASPHGGA