Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_1716 |
Symbol | |
ID | 4908235 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | - |
Start bp | 1596052 |
End bp | 1597188 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640125463 |
Product | radical SAM domain-containing protein |
Protein accession | YP_001056599 |
Protein GI | 126460321 |
COG category | [R] General function prediction only |
COG ID | [COG0535] Predicted Fe-S oxidoreductases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.174012 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGAGCG TGGAGGAGCT CATTAGGCGA TTCCACGAGG CCCCCTTGTT GGTCTTCTGG GAGTCCACAA AGGCCTGTCC CCTTGCTTGT AAGCACTGTA GGGCTGACGC AATTTTAAAG CCTCTCCCGG GCGAGCTGTC AACTGAGGAG GGGAAGAGGC TTATTGAGCA AGTGGCGGAG TTTGGAGACC CCAAGCCCCT CCTCATTATA ACCGGCGGCG ACCCGTTGAT GAGGGCGGAC CTCTTCGAGC TTGTGGACTA CGCCAACTCC CTGGGGGTGC CCGTCTCGCT TGCCCCCGCC GTTTCAAAGA GCTTAGACGA CGAGGCCCTT AGGCGTATCA AGTCTTCTGG CGTCAAGTCT ATCTCGATAA GCCTAGACGG GGCCACGGCT GAGACTCATG ACGAGTTGAG GGGGGTCCCG GGTAGCTTTG CTGAGACAGT GTCTGCGATA AAGAGGGCGC TGGACTTGGG CATATCTGTC CAAGTCAACA CTGTGGTGTG GAAGAAGTCG CTCAGCGAGC TCCCCGACGT GGCGTACCTC CTCCGCAGGC TCGGGGTAAA GGTGTGGGAG GTCTTCTTCC TCATTGTAAC TGGCAGAGCC AAGGAGGAGT TGGACATCTC GCCTGCGGAG TACGAGTCCG CTGTTCAGTT CCTTGTCGAC GTGTCCACCT ACGGGTTCCA AGTCAGAACT GTCGAGGCCC CGTTCTACAG GAGGGCCAAG CTTGAGAGGT TGCGCGGAAA GGCCTACAGC GATCTCCTTT ACGACAAGCT TGTAGCAAGG CTGAGGGAGC TTCTGGGCCC GCCTCAGCGG GGCGTTGACC CCACTATTGT GCCCACGCGG GATGGCTTTG GCATAATCTT CGTGGGGCAC GACGGCACTG TGACCCCAAG CGGCTTCCTC CCCTACCCCC TGGGCAATGT GCGGAAAAGG CGCCTAGTGG ACATCTACCG CAACCACCCC CTCCTGGTGA AAATGCGGCG TGGCGAGTTT GAGGGCAGAT GTGGCGTGTG CGAGTATAAG GACATATGCG GCGGCTCGAG GGCCCGGGCA TTCGCCGTGT TTAAAAACCC GCTGGCGGAG GACCCAGCCT GCGTTTATAT CCCCAGTAGT TGGAAGAGTG TGGAGATGAC GCGGTGA
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Protein sequence | MRSVEELIRR FHEAPLLVFW ESTKACPLAC KHCRADAILK PLPGELSTEE GKRLIEQVAE FGDPKPLLII TGGDPLMRAD LFELVDYANS LGVPVSLAPA VSKSLDDEAL RRIKSSGVKS ISISLDGATA ETHDELRGVP GSFAETVSAI KRALDLGISV QVNTVVWKKS LSELPDVAYL LRRLGVKVWE VFFLIVTGRA KEELDISPAE YESAVQFLVD VSTYGFQVRT VEAPFYRRAK LERLRGKAYS DLLYDKLVAR LRELLGPPQR GVDPTIVPTR DGFGIIFVGH DGTVTPSGFL PYPLGNVRKR RLVDIYRNHP LLVKMRRGEF EGRCGVCEYK DICGGSRARA FAVFKNPLAE DPACVYIPSS WKSVEMTR
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