| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1708 |
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| Symbol | |
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| ID | 4909057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1590539 |
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| End bp | 1591510 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640125455 |
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| Product | AsnC family transcriptional regulator |
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| Protein accession | YP_001056591 |
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| Protein GI | 126460313 |
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| COG category | [K] Transcription |
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| COG ID | [COG1522] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00654875 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACGCCA AGACGGTGGA CTTGCTAATG GCTGTGCAAT ACGACTTCCC CCTAGTGGAG
AGACCTTTTC AAGCAATTGC GGATACCCTG GGGACCTCTG AGTCGTGGGT ATTGGAGAGG
CTTAGGGAGG CCGTCTTGAG CGGGGTGTTG AAGCGCATAG GCGCAATCCT CAATTACAAG
TCCCGCGGCA TGGTGGCCGC GTTGGTGGGC ATGGCGGTGC CTGAGGATAG GATCGAGGAG
GTGGCGGCCG AGGTTAATAG GGATCCTATG GTCAGCCACA ACTTCCAGCG CGACTACAGG
CCGTACAACC TCTGGTTTGT AACTAAGGCG CACTCGAAGG AGGAGCTAGA GGCCAAGGTG
AAGGCTGTGG CGGACAAGTT CGGCGTAGAC TACGTGGTAC TTTACTCGCT CAGGTCCTAC
AAGGTGGATG TCAGATTCGA CCTCCGCCGC GGCATCTCTT GGACCAGGGG GTACATAATG
CCGGAGGATC CGCCCTCTGT GAAATCGCTG GGAATTCCGA TGGAGTTCTT TGGAAAAATC
AAATCGCTAC CGCTTGTCCC AGAGCCGTTC AAGGAGGCAG CCGCGGTGCT GGGTTTGTCG
GTTGCACAGA CCCTTGAGAA AATAAAGGAG TTGATAAAGC TGGGCGTACT CCGCGATTTA
CACGCCACGT TAGACGGAGA GGCTGTCGGC TTTAGAGAAA ACGCCATGGT GGTAATGAGG
GAGGCCAAGT GCGAAGAGGT GGCGATGTTG CCCATCTCTA CCCATGTGGT TTTGAGAAAC
ACAGTGCCAG GGAAGTGGGA ATACCCCTGC TACTTCATGG TACATGGGAC AAGGCGAGAC
GTGATTGAGT CATATGTACA AGAGTCATTG CGCAAGCTAG GCGTGGAAAA GTATGCAGTA
TTGTACAGCG TCCGCGACTT CCTCGGCGGC AGAGAGATGG GGAAGAGGGT TGAAAGAGTC
GCGGAAATCT AA
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| Protein sequence | MDAKTVDLLM AVQYDFPLVE RPFQAIADTL GTSESWVLER LREAVLSGVL KRIGAILNYK
SRGMVAALVG MAVPEDRIEE VAAEVNRDPM VSHNFQRDYR PYNLWFVTKA HSKEELEAKV
KAVADKFGVD YVVLYSLRSY KVDVRFDLRR GISWTRGYIM PEDPPSVKSL GIPMEFFGKI
KSLPLVPEPF KEAAAVLGLS VAQTLEKIKE LIKLGVLRDL HATLDGEAVG FRENAMVVMR
EAKCEEVAML PISTHVVLRN TVPGKWEYPC YFMVHGTRRD VIESYVQESL RKLGVEKYAV
LYSVRDFLGG REMGKRVERV AEI
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