| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1701 |
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| Symbol | |
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| ID | 4908126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1584288 |
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| End bp | 1585409 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640125448 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_001056584 |
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| Protein GI | 126460306 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00120296 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTATATTG TAGTTGGTGG GGGCGTTGTT GGACTCTTCT CCGCTGTATA CCTCGCCCGC
GAAGGGGCGG ATGTTGTCCT GGTGGACTCC GCGCCTGGAG GCTGGTCGAA GGCAGCCGCG
GGCGTGTTAG AGCCGACAAA ATTTGAGATA AATAGAATAA ACGTGAGGGG TTACCCCGTC
AGGTACATAA AGATGTGGCT TAAGGGTAAG GCCCGCATCG CTAGACTGGA TTGGCGTTGG
ATTTTGACCT ATATCAAGGT ATATGGAAGA GAATACCCAG AGGAGATCTG GAACCAGGTC
AAAGAGCTAG CGCGTTTTTC TATATCTGAA TATCGCCGAC TTGCCGAAGA GAAAAACGAT
TTTGAATTTA GGGAGGAGCC CCTCTACGAG GTGGTGGAAG ACATAGAGGC TGAAGTTGCG
GCGCTTAAGC AAGATCCGCT CAAGCCCAGG TTCGACGTGG GGGAGGTAAA GGGTAGACGG
GCGATAGTAT ACCTAGACTC CGTGGTTATT TCCACGGACT TGGCCGTAGA AAGGCTCTAC
AGAGAGGTTG CGTCTAGAGG TGTGAGAATT GTGAATAAGA AAGCGAGCAG AGTAGAAGAG
GGGCGCGTCG TCTTGGAAGA CGGCGAGATT TTAAAAGGCG ATGGGGTAAT AGTGGCTGCT
GGCTGGTGGG CCAGAAGGCT AGGCGTTCCC GTGGCGCCGT TAAAGGGATA TGGGTTTAGG
CTAGTTGCGC GGTGGTCCGG TCCTACAGTC GCCGACTTTA TAGGTGGCGT TTTTCTAGTC
CCATTCAAGG GGTGGATCAA GGCCACTGGG CGCTTCGACT TAGACGCATC ACCAGACCAC
TCGCCGTCAA GGAAGGTGTT GGCCGCGGCT AAGACGTGGC TTGGCGACTT CGAAGTAATG
GACATGGCCG TGGGGTATAG GCCCTGTGCG CCCGACGGCC TCCCCGTGAT AGAGAGACGC
GGCGGCGTCG TGGTAGCCAC AGGCGGTTGC CGCCTAGGAT GGACCCTAGG GCCCGGCATT
GCCCATGCCG CAGTTCAACT ACTCCTCGGG AGGTCGGCCA CGGCCCTAAC AACGGCGAGA
TTCAGCGCCG GCAAGCGCTT AGCGGCTGCA CTAAAACATT AA
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| Protein sequence | MYIVVGGGVV GLFSAVYLAR EGADVVLVDS APGGWSKAAA GVLEPTKFEI NRINVRGYPV
RYIKMWLKGK ARIARLDWRW ILTYIKVYGR EYPEEIWNQV KELARFSISE YRRLAEEKND
FEFREEPLYE VVEDIEAEVA ALKQDPLKPR FDVGEVKGRR AIVYLDSVVI STDLAVERLY
REVASRGVRI VNKKASRVEE GRVVLEDGEI LKGDGVIVAA GWWARRLGVP VAPLKGYGFR
LVARWSGPTV ADFIGGVFLV PFKGWIKATG RFDLDASPDH SPSRKVLAAA KTWLGDFEVM
DMAVGYRPCA PDGLPVIERR GGVVVATGGC RLGWTLGPGI AHAAVQLLLG RSATALTTAR
FSAGKRLAAA LKH
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