| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1700 |
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| Symbol | |
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| ID | 4909587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1582919 |
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| End bp | 1584265 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640125447 |
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| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
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| Protein accession | YP_001056583 |
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| Protein GI | 126460305 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.000494976 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGTGCGTG TAGTGATTGT AGGTGGCGGG GCCGCTGGCG CCTCGGCGGC GGCGCGGGCA
AGGCGTCTAG ACCCATCGGC CGAAGTGGTG TTGATAGAGA GGGGCTCTAT GATTACACAT
GCCCCTTGTG GCATGCCGTA CGCCATAGGC GGAATTGTGA AAAGCCATGA GGAGCTGATG
ACGTACAGCC CCGAGGAGTT TGAGAAGGAG AGAAACATCA AGGTATTGAT ACGTACAGCC
GTGGTGGATG TAGATGTGGA CAAGAGGGTG GTAGTTGTAA AGAGGGGCGA GTCTACTGAG
AAAATTGCGT GGGACAAGTT GGTCATAGCC ACTGGCGCAA AGCCCCTCGT GCCTAAGATC
CCCGGAGTTG AGCTAAAGGG CATTCTCACA ATGCGGCACC CAGACGAGGT GCCTCACTTG
AAGGGCCACC TAGAAAAGGC TAAGACAGTC GCGGTGGTGG GAGGGGGGTA CATAGGGGTC
GAAATGGCGG AGGTCCTTCT GGAGATGGGG AAGAGGGTGC TCCTATTTGA GATGTTTGAC
CAAGTCCTCC CCGCGGCGCT TGACCCCGAC GTCGCAGCCA TAGTCGCCGA GGAGATGAAG
AGCAGAGGCG TGGAGCTACA CCTAGGCGAG AAAGTGGTGG AGTTCAAGGG CTCCGACCAT
GTGAACAAGG TGGTGACAGA GAAGGGGGAG TACCAAGTAG ACGAGGTGGT CCTCGCAGTT
GGAGTTAGGC CAGACGTAGA CTTGGCTGTG CGCGCGGGGG CAAAGCTGGG GGAGACCGGG
GCCGTCTACG TAAACGAGTA CATGGAGACC ACAGTTCCCG ATGTTTACGC TGCAGGCGAC
GTGGCGGAGA AAGTCCATAG GATCACAGGG AGGAGGGTGT GGATACCGCT GGCCCCCACG
GCCAACAAGG AGGGGCAGGT GGCCGGCGGC AATGCGGTAA AGGGCCGCGT TTTAAAGTTC
CCAGGAGTGG TGGGCACGGC TGTCACAAAG TTCTACGACT TATACATAGC AAGAACGGGG
CTGGGAGAGA AAGAGGCGGC ACAGCTAGGC TTCAAGGTGC AGAGCAGCCT AATAAAGGCG
AGGACAAAGG CGCACTACAT GCCAAACGCC TCGCCTGTCC ACGTAAAGCT TATCGCCGAG
GAGTCCACAG GGCGCATACT CGGGGCTCAA ATCGTCGGCA AAAGTCAAGT AGTGGCCGCG
TACGCAGACA TAATGGCCGT TACCATACAG TCGGGCTACA CCCTCTCCGA CCTCTTCTTC
TCCGACCTAG GCTATATGCC AGACACGGCG CCTGTGTGGC ACCCCCTCAT AGTTGCGGCA
CGAGTATTAA GCAAGGGCCG TTTATAA
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| Protein sequence | MVRVVIVGGG AAGASAAARA RRLDPSAEVV LIERGSMITH APCGMPYAIG GIVKSHEELM
TYSPEEFEKE RNIKVLIRTA VVDVDVDKRV VVVKRGESTE KIAWDKLVIA TGAKPLVPKI
PGVELKGILT MRHPDEVPHL KGHLEKAKTV AVVGGGYIGV EMAEVLLEMG KRVLLFEMFD
QVLPAALDPD VAAIVAEEMK SRGVELHLGE KVVEFKGSDH VNKVVTEKGE YQVDEVVLAV
GVRPDVDLAV RAGAKLGETG AVYVNEYMET TVPDVYAAGD VAEKVHRITG RRVWIPLAPT
ANKEGQVAGG NAVKGRVLKF PGVVGTAVTK FYDLYIARTG LGEKEAAQLG FKVQSSLIKA
RTKAHYMPNA SPVHVKLIAE ESTGRILGAQ IVGKSQVVAA YADIMAVTIQ SGYTLSDLFF
SDLGYMPDTA PVWHPLIVAA RVLSKGRL
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