| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1699 |
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| Symbol | |
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| ID | 4909393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1581924 |
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| End bp | 1582853 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640125446 |
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| Product | malate dehydrogenase |
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| Protein accession | YP_001056582 |
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| Protein GI | 126460304 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0039] Malate/lactate dehydrogenases |
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| TIGRFAM ID | [TIGR01763] malate dehydrogenase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.000446484 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATAACAA TAGTGGGAAG CGGTAGAGTG GGAACAGCAG CCGCGGCCAT AATGGGAATA
ATGAGGATAG ACAAAAAAAT ACTACTAATA GACATAGTAA AAGGCTTACC ACAGGGAGAG
GCGCTCGACT TAAATCACAT GAGCGCAATA CTCGGCCTAG ACGTAGAGTA CGAGGGTAGC
AACGACTACA AAGACATGGC TGGAAGCGAC TTGGTCATAG TCACCGCCGG CTTCCCCAGG
AAGCCAGGCA TGACGCGCGA ACAATTAGTT GAGACAAATG CAAAAATTGT AAGCGACATA
GGCAAAGAGA TTAAGAAGTA CGCCCCAGAC TCCGTTGTGA TATTAACCAC GAACCCCCTA
GACGCCATGA CCTACGTGAT GTGGAAATCC ACGGGGTTCC CCAGGGAGAG GGTGATTGGC
TTCAGCGGCG TATTAGACGC GGGCCGCCTA GCCTACTACG CCGCCAAAAA GCTGGGAATT
TCGCCGGCCT CGATACTCCC CATAGTGCTG GGCCAGCACG GAGAGAGCAT GTTCCCAGTG
CCCTCCAAGA GCTTTGTACA CGGAGTTCCC CTGAGCAAGT TGCTAAGCGA AGACCAGCTG
AGGGAGGTGG TTGAGGAGAC GGTAAAGGCG GGGGCCAAGA TCACCGAGCT CCGCGGCTTC
TCATCCAATT GGGGCCCCGG CGCTGGCTTA GCCATTATGG CCGACAGCGT AAAACGCGAC
GCACGCCGCT CGTTAATAGC CTCGGTAGTG CTGAAGGGCG AATACGGCGT CTTTGACCTG
CCAGTGGAAG TGCCCATAGT GTTAGGCAAG ACAGGCGTAG TAAAAGTGCT GGAGATTGAG
CTCACGCCAG AGGAAAAGGA GAAATTTAAC CAAAGCGTTG AAGCCATAAG GAAGCTCGTA
GGCACAATAC CGCAGTCGTA TCTCCAGTAG
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| Protein sequence | MITIVGSGRV GTAAAAIMGI MRIDKKILLI DIVKGLPQGE ALDLNHMSAI LGLDVEYEGS
NDYKDMAGSD LVIVTAGFPR KPGMTREQLV ETNAKIVSDI GKEIKKYAPD SVVILTTNPL
DAMTYVMWKS TGFPRERVIG FSGVLDAGRL AYYAAKKLGI SPASILPIVL GQHGESMFPV
PSKSFVHGVP LSKLLSEDQL REVVEETVKA GAKITELRGF SSNWGPGAGL AIMADSVKRD
ARRSLIASVV LKGEYGVFDL PVEVPIVLGK TGVVKVLEIE LTPEEKEKFN QSVEAIRKLV
GTIPQSYLQ
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