Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_1693 |
Symbol | |
ID | 4909966 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | - |
Start bp | 1575898 |
End bp | 1578684 |
Gene Length | 2787 bp |
Protein Length | 928 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640125440 |
Product | DEAD/DEAH box helicase domain-containing protein |
Protein accession | YP_001056576 |
Protein GI | 126460298 |
COG category | [R] General function prediction only |
COG ID | [COG1201] Lhr-like helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.000881072 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGTCTTTC ACCTGCTTCA TCCGCTGGTC GTGGAGGCGT TGCGAGAGAG GGGGATAACG GAGCCCACGG AGCCTCAGAG GGCGGCTATT CCAGAGGTGC TCTCTGGAAA CAACGTGTTG ATAATAGCGC CGACTGGTAG CGGGAAGACC GAGGCGGCAA TGTTGCCGAT TCTCTCCAAG ATGTTGGAGA ACGGAGTGGC CGACAAGTCG GGAATATTTG TGCTCTACAT AACGCCGCTC CGCGCGCTTA ATAGAGACTT GTTAGATAGG ATAAAGTGGT GGGGCGAGAG GCTGGGGTTC TCGGTGGATG TGCGCCATGG CGACACTGAT AAGGCAGATA GGCAGAGGCA GAGCCGCAAG CCTCCCCACA TCTTAATCAC CACCCCCGAG ATGTTGCAAG CCATCTTGAC TGGCAGAAAG CTTTTGGAAC ATCTGAGGGA GTTGAGGTGG GTCGTCGTAG ACGAGGTCCA CGAATTGGCA GAGGACAAGA GGGGGGTCCA GCTATCGCTT GCCCTAGAGA GGCTTAGATA CCACGTGGGC CGCGACTTTC AAATCGTCGG CCTCTCAGCC ACGGTGGGCT CGCCTGTTGA AGTGGCCAAG TTTCTGGTGG GGGATGGCAG ACCGTTTAAA GTGGTCATGG TGAACTTCGC CCGGCATATA CAACTGGACG TGGCTAGGCC GCGCGCAAGT GACGAGGACC GCAAATTGGC AGAGGCCAGC GGCTTGTTCC CCGACGTGGT GGCTCGGCTG AGACTAATAA AGAGGCTTAT TGAAGAGAAT AGGAGCACTC TCATCTTCAC AAACACTAGG AGCATGGCCG AGCTGTTGGG CTTCCGCCTC TCCTACCTCT ACGGCGACCT CCCCGTGGCA GTCCACCACT CCTCTCTCTC TAAGATGGTG AGGATATCGG TGGAGGAGAG GTTGAAGAAG GGCGAGCTAA AGGCGGTGGT GGCTACGTCA AGTCTCGAGC TTGGGATAGA TATAGGCCAC GTCGACTTAG TCATTCAATA CGTCTCGCCG CACCAGGCCA CTAGATTGCT ACAGAGGGTG GGCCGCAGCG GCCATAGGCT AAGCGCTGTT CCAAGGGGCA TTGTAATAGC CGAGGACATC AACGACGTGT TGGAGTCTGT GGTGATTGTG AGGAGGGCTA AGGCGGGGCT GATAGAGCCG ACGCAGATTC CATACAAGCC TTACGACGTG TTGGTAAACC AGATAGTGGC GTTCCTCCTC TTAAAGCCCA GGTGGCAGAT TGAGGAGTTG TACAAAGTAG TGAAAAGGGC GTACCCCTAC CGCGATTTGA CTATGGACGA GCTTAGGAGG GTGATTAAAT TTATGCAAGA TTTGTACCCG AGGCTTGCCC TCTACTACGA GGACAGCGAC ACGGTGGTTA GGCCCAGGAG CCGCGGCTTT TACCGCTACT TCTACGAGAC TCTCTCCATG ATACCCGACG AGAGGCAATA CGCTGTGATA AACGAGAAGA CTGGCGAACT AGTGGGTACA TTAGACGAGT CCTTTGTCGC AGAGTACGGT GAGGCGGGGG TCAAGTTCAT ATTTAGGGGG ATGCCCTGGC TCATAACGCG CGTGGACGAA AAAAGCGTGT ACGTAGTAGA GGCGTCTGAC CCCTCGGGCG CAATACCCAG CTGGGTGGGA GAAGAGATCC CAGTGCCCTT CGAAGTGGCG CAGGAAGTGG GGATCCTGCG CAGGAGGATT AAAGAAGGCG CAGAGGTGGG CGAGTTGGCG AGAGAGTATG GAGTCAGCGA GGAGGTCATT AAAGACGCCG CAGAGGAATT GGCAAAGCAT AGAGGCCCCC TCCCCGACGA TAGGACGGTG GTTATTGAAC AGTACAGGGA AAACATCGTA ATTGTCCACG CGGCGTTTGG CACCTTGGTC AACAGGACTC TTGGAAAGCT CTTAGGCGAG TTGTTAATTA GAAGACTTGA GAAGCCGGTG GGAGTTCACC AAGACCCCTA CGGCATAATA ATACAGTTCT CGGAGCCCCT ATCCGCCGCC ACGGTGGGCG AACTTCTCAA CGCCCTGGCG CGCATGGACG CCAAAGAGCT GGCCGAACTC TTAAAGTCCG CCCTTGTGAA GTCCGGCTCC TTCAAGCGCA GGATTTTACA CGTGGCCAAG AGAATGGGTG CGATAGACAA GGAGGCCGAT GTACACAGCG TAAGTATGTC GAAGCTCGTC GAAGCGTTCA GCGGCACGCC TGTCTTTGAT GAGGCAATAA GAGAGACTCT CGAAAGAGAC CTGGACTTAG ATCACACGGC TCAAGTCCTC CAAGACATTG CCAGCGGCAG AATCAAAGTG GTATATTCAG ACGGGCCCAC ATACCTAGGC GAAGTTCTCT ACGAGAAGAT GTCCCACAGA CTTGAGGTTA TACCGCCGGA GAAGCTCAAG CGCCTTGTGT TAGACAGCAC TAAGGCGAGG CTTTTAAACT ACACAATGCT CGCGGCGTGT TTAAACTGCG GCTGGTACGG CCTCGTGAGA GTAGGCGAAG TTGCCGAGCT CAAGTGCCCC AGGTGCGGCG GCATCGACGT AGGCGTAGTT AGAGTGATCA AAAGCGACAA CTTAGAGCGC GAAGTGAAGA GAGGCTTGGA GGAGGTCAAG CGGACGTCTG AGATTTTGAA AAAATACGGC TGGCTAGGCC TATACGCCCT CGCCTCAAAA CTGCCCCTAG ACGCTGTGGA ATATGTCCTA TCCACCTCGG ACTCCGACTT AAACAAACTC ACTGAGAAAA TACAAGAGGC AGAAAAGGAG TATCTAAAAC AGAGGTTGCT CGACTAG
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Protein sequence | MVFHLLHPLV VEALRERGIT EPTEPQRAAI PEVLSGNNVL IIAPTGSGKT EAAMLPILSK MLENGVADKS GIFVLYITPL RALNRDLLDR IKWWGERLGF SVDVRHGDTD KADRQRQSRK PPHILITTPE MLQAILTGRK LLEHLRELRW VVVDEVHELA EDKRGVQLSL ALERLRYHVG RDFQIVGLSA TVGSPVEVAK FLVGDGRPFK VVMVNFARHI QLDVARPRAS DEDRKLAEAS GLFPDVVARL RLIKRLIEEN RSTLIFTNTR SMAELLGFRL SYLYGDLPVA VHHSSLSKMV RISVEERLKK GELKAVVATS SLELGIDIGH VDLVIQYVSP HQATRLLQRV GRSGHRLSAV PRGIVIAEDI NDVLESVVIV RRAKAGLIEP TQIPYKPYDV LVNQIVAFLL LKPRWQIEEL YKVVKRAYPY RDLTMDELRR VIKFMQDLYP RLALYYEDSD TVVRPRSRGF YRYFYETLSM IPDERQYAVI NEKTGELVGT LDESFVAEYG EAGVKFIFRG MPWLITRVDE KSVYVVEASD PSGAIPSWVG EEIPVPFEVA QEVGILRRRI KEGAEVGELA REYGVSEEVI KDAAEELAKH RGPLPDDRTV VIEQYRENIV IVHAAFGTLV NRTLGKLLGE LLIRRLEKPV GVHQDPYGII IQFSEPLSAA TVGELLNALA RMDAKELAEL LKSALVKSGS FKRRILHVAK RMGAIDKEAD VHSVSMSKLV EAFSGTPVFD EAIRETLERD LDLDHTAQVL QDIASGRIKV VYSDGPTYLG EVLYEKMSHR LEVIPPEKLK RLVLDSTKAR LLNYTMLAAC LNCGWYGLVR VGEVAELKCP RCGGIDVGVV RVIKSDNLER EVKRGLEEVK RTSEILKKYG WLGLYALASK LPLDAVEYVL STSDSDLNKL TEKIQEAEKE YLKQRLLD
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