| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1686 |
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| Symbol | |
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| ID | 4908152 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1570137 |
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| End bp | 1571906 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640125433 |
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| Product | putative ATPase RIL |
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| Protein accession | YP_001056569 |
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| Protein GI | 126460291 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1245] Predicted ATPase, RNase L inhibitor (RLI) homolog |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.000842642 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGTCCGCA TCGCGGTGGT GGACAGAGAT GCGTGCCAAC CGAGGAAGTG TGGACACGAG
TGTGTAAAAT ACTGCCCGGT GAATAAGAGT GGGAAAGTTG TATACATCGA CGAACAGCTA
AAGAAGGCGG TTATATCTGA GGCTCTCTGC ATAGGTTGCG GCATATGTGT CCACAAATGC
CCCTTCGACG CCATTACCAT TGTAAATCTG CCCGACGAGC TCGAGGGCGA GTGCGTCCAC
AGGTATGGCC CAAGCGGATT TAAGCTGTAC AGACTCCCCA TCTTGAGGAA GGGCAAGGTG
GTCGGCATCT TGGGCCGCAA CGCGCTGGGG AAGACGACTA TGGCAAGGAT TTTGGCAGGG
GAGCTTGTGC CCAACCTCTG CGGCGACGGC CAAGCGACTC CAGAGGAAGT GGTCAAGAGG
TTTAGAGGCA CAGAGCTCCA GACCTACTTC TCAGAGCTCT ACGCCAAGAA GCTTAGGACG
GTGCACAAGA TACAGTACAT AGAGCTGATA CCCATGTACC TAAAGGGCAC AGTGGGCGAT
GTGGTCAAGA AGGCGGGCAT AAAGGAGGAG CTTCTCCGCA GATTTGGACT AGACAAGCTC
CTGGAGCGGC CTGTTGAGAA TCTTTCGGGA GGCGAGCTCC AGAAGTTGGC AGTGGCGGCC
GCGCTTTCAA AAGACGCCGA CGTCTACATA TTCGACGAGC CTGCCACGCA CCTAGACATA
GTGGAGAGGG TCAAAGTCGC CGACGCCATT AGAGAGGGAG CCGCGGGCAA GTACGTACTA
GTAATCGAGC ACGATCTAAC GGTGCTGGAC TTCTTGGCGG ACAACGTGGT GATAGTATAC
GGCAAGCCTG GGGCCTACGG CATAGTGTCA TACCCAGCTG GGGCCAGAGA GGCGATAAAC
GAGTACCTCT CTGGCTACAT CTCATCCGAG AACATGCGGA TTAGAGACCG CCCTATAAAA
TTTGAGACAA GGCCCCCCGA GAGGAAAGGA GGTAGGGCGG CCCGCCTCGT GGAGTGGGAA
GACTTGCTCA TAGACCTGGG AGGCTTCACT CTGGAGGTGT CGGCATCGTA TATAGCGAAG
GGGGAGGTAG TCGGCGTAAT AGGCCCCAAC GGAATTGGAA AGACAACTTT CCTAAGAGCC
CTCGTGGGGG AGGTGAAACC TGCGAAGGGC GCCGTAAGCA CGACGCTTAG AATTAGCTAT
AAGCCACAGT ACGTAAGAGA CATAGCGGTC AAAAACCAAG ACGTGCCTGT GGGCCTGTGG
CTTGCCCAGC AGGTAGGAGA CTACTCGGAA AACCCAATAT GGCCCGACTT GAACTCAAGC
TTCAACTTGA CCCCCCTCCT TGAGAAAAAG ATGGGGGAGC TCTCCGGCGG AGAGCTCCAG
AGAGTCGTCG TGGCGGCCGC CTTGCTTAAG AAGGCCGACC TCTACGTCTT AGACGAGCCG
ATGGCATACC TAGACGTTGA GCAGAGGATC ACAGTGGCGA GGACAATTCG GCGGATTATA
GAAGAGAGCG AAGTGGCCAT GCTGGTGGTA GAACACGACA TAGCAATGCT GGACTATATG
TCAAATGCCA TAATGCCGTT CTTAGGTGAG CCAGGGGTGA GGGGTAAGTC GCCAGGCGTA
GTAGACATGA GGACAGGAAT GAACATGTTC CTCAAATGGG CCGACGCCTC CTTTAGACGC
GACGTCAAGT CAGGTAGGCC GCGGCTCAAC AAGCCCGGCT CGGTGTTAGA CAGAGAACAG
AAAGAGAGAG GAGAGCTGTA CTACATTTGA
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| Protein sequence | MVRIAVVDRD ACQPRKCGHE CVKYCPVNKS GKVVYIDEQL KKAVISEALC IGCGICVHKC
PFDAITIVNL PDELEGECVH RYGPSGFKLY RLPILRKGKV VGILGRNALG KTTMARILAG
ELVPNLCGDG QATPEEVVKR FRGTELQTYF SELYAKKLRT VHKIQYIELI PMYLKGTVGD
VVKKAGIKEE LLRRFGLDKL LERPVENLSG GELQKLAVAA ALSKDADVYI FDEPATHLDI
VERVKVADAI REGAAGKYVL VIEHDLTVLD FLADNVVIVY GKPGAYGIVS YPAGAREAIN
EYLSGYISSE NMRIRDRPIK FETRPPERKG GRAARLVEWE DLLIDLGGFT LEVSASYIAK
GEVVGVIGPN GIGKTTFLRA LVGEVKPAKG AVSTTLRISY KPQYVRDIAV KNQDVPVGLW
LAQQVGDYSE NPIWPDLNSS FNLTPLLEKK MGELSGGELQ RVVVAAALLK KADLYVLDEP
MAYLDVEQRI TVARTIRRII EESEVAMLVV EHDIAMLDYM SNAIMPFLGE PGVRGKSPGV
VDMRTGMNMF LKWADASFRR DVKSGRPRLN KPGSVLDREQ KERGELYYI
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