Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_1684 |
Symbol | |
ID | 4910241 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | - |
Start bp | 1569152 |
End bp | 1569616 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640125431 |
Product | hypothetical protein |
Protein accession | YP_001056567 |
Protein GI | 126460289 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.000421431 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATAGGG CTACGAGGGC CTACATCGCC GGCCTCGCGG CAGGCGGCTG CGTTGTGAGG GGGTTGAGGC CCCACATCTC GATGTGGCTG AGAGACTTAG GCTTCAGAGT TGAGGGAGAC GCGGCGGAGT TGCCCGAGGA GTTCTGCAGG TACAAGCCGA CAACTCTCCT GGAACATGTA TACTTCCTCA AGGGCGTATT TGAGGCACAC GGCGAGCTCT TCCTAGCGGA CCCCCACGGA GGCGACATGG TGTTAATAAT AAGGCTGTGG GATAGAAGGG TGAGAAATTC GCTGTCTCTT CTTGGCATAA GACCCCTGGA GACCACAGAC GAGGGCGGCC AACGCCGTTT CACAGTTGTC TACAGGAGAA GAGATGTGGC GCGTTTCATA AAATTCGTAA AGCCGGTTAT AGACGACGTG GCGATTGCCG AGCGCTTGGG CTTATGCACG CCGAGGCGGT CCTAG
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Protein sequence | MNRATRAYIA GLAAGGCVVR GLRPHISMWL RDLGFRVEGD AAELPEEFCR YKPTTLLEHV YFLKGVFEAH GELFLADPHG GDMVLIIRLW DRRVRNSLSL LGIRPLETTD EGGQRRFTVV YRRRDVARFI KFVKPVIDDV AIAERLGLCT PRRS
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