Gene Pcal_1684 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1684 
Symbol 
ID4910241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1569152 
End bp1569616 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content57% 
IMG OID640125431 
Producthypothetical protein 
Protein accessionYP_001056567 
Protein GI126460289 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.000421431 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATAGGG CTACGAGGGC CTACATCGCC GGCCTCGCGG CAGGCGGCTG CGTTGTGAGG 
GGGTTGAGGC CCCACATCTC GATGTGGCTG AGAGACTTAG GCTTCAGAGT TGAGGGAGAC
GCGGCGGAGT TGCCCGAGGA GTTCTGCAGG TACAAGCCGA CAACTCTCCT GGAACATGTA
TACTTCCTCA AGGGCGTATT TGAGGCACAC GGCGAGCTCT TCCTAGCGGA CCCCCACGGA
GGCGACATGG TGTTAATAAT AAGGCTGTGG GATAGAAGGG TGAGAAATTC GCTGTCTCTT
CTTGGCATAA GACCCCTGGA GACCACAGAC GAGGGCGGCC AACGCCGTTT CACAGTTGTC
TACAGGAGAA GAGATGTGGC GCGTTTCATA AAATTCGTAA AGCCGGTTAT AGACGACGTG
GCGATTGCCG AGCGCTTGGG CTTATGCACG CCGAGGCGGT CCTAG
 
Protein sequence
MNRATRAYIA GLAAGGCVVR GLRPHISMWL RDLGFRVEGD AAELPEEFCR YKPTTLLEHV 
YFLKGVFEAH GELFLADPHG GDMVLIIRLW DRRVRNSLSL LGIRPLETTD EGGQRRFTVV
YRRRDVARFI KFVKPVIDDV AIAERLGLCT PRRS