Gene Pcal_1667 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1667 
Symbol 
ID4909464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1556534 
End bp1556842 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content55% 
IMG OID640125414 
ProductCutA1 divalent ion tolerance protein 
Protein accessionYP_001056550 
Protein GI126460272 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1324] Uncharacterized protein involved in tolerance to divalent cations 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.024619 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACACCG CTGTATTAAT AACCGCGCCT AGGAAGGACG CGGAGAAAAT CGCCAGACAC 
CTCCTAGAGA GGAGAGTAGC CGCATGCGTC AATATAGCAG ACGTGAAATC CTTGTACTGG
TGGGAGGGCA AGATCGAGGA GGGCGAGGAG GCCCTACTGA TTGTAAAAAC TTCCACCGAT
AAGCTGAACG ATTTGGTCAA AGAGGTGAGG GCCGTCCACC CGTACCAAGT GCCGGAGGTC
GTGGCGCTTC CCATAATCGG CGGGTATAGG GAGTACTTAA GCTGGGTGGA GAGGGAGACC
CATGCCTAG
 
Protein sequence
MYTAVLITAP RKDAEKIARH LLERRVAACV NIADVKSLYW WEGKIEEGEE ALLIVKTSTD 
KLNDLVKEVR AVHPYQVPEV VALPIIGGYR EYLSWVERET HA