| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1660 |
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| Symbol | |
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| ID | 4909328 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1550241 |
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| End bp | 1551452 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640125407 |
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| Product | threonine dehydratase |
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| Protein accession | YP_001056543 |
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| Protein GI | 126460265 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR00260] threonine synthase
[TIGR01127] threonine dehydratase, medium form |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0212485 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATACTTC TCGAAGAGGC TTTAGAGGTA ATTAGGCAGA AGCAGAGCGA GGGCAAGATC
CACAGAACTC CCACGCTTAG GTCTGAGTCT CTGTCGAGGA TAGTGGGCGG CGACGTCTAT
CTAAAGCTTG AGGCGCTTCA GAAGACTGGC TCCTTCAAGA TAAGGGGGGC CTACTTCGCC
ATGCACAAGT ACATACAGGA GGGGTACAGA GAATTTATAA CCGCCTCCTC GGGCAACCAC
GCCCAGGGGG TGGCCTACGC GGCGCAGTTG CACGGGGTAA AGGCCACCGT GGTTATGCCG
GAGACTACGC CGTGGCTCAA GGTGAAGAAG ACCCAGGACT ATGGGGCCTC CGTAGTTTTA
TACGGCGAGA GCTACTACGA GGCGGAGAAG AGAGCCCGTG AGCTGGTTAG GGAGGGGGTA
AAGTTCCTCC ACGCCTACGA CGACTACTAT GTGATATCGG GCCAGGCCAC GCTAGGCGCC
GAAATTGTCG AAGACGTGCC CGACGTAGAT GTCGTCGTAG TGCCCGTGGG AGGGGGCGGC
CTAATATCCG GTGTCGCCTA TGCGGTAAAG AGGCGGAGAC CTAGCGTGAA GATTATAGGC
GTGCAGGCCA GCGGGGCGCC AGCGGCTTAT TTGTCCTTCC GCGAGGGTAA GCCTGTCACA
ATAGAAAAAG TGGATACAAT AGCCGACGGC ATAGCGGTTA AGCGGCCCGG CGATATAACG
CTGAAGCTTA TGCGCGAATA TGTCGACGAC ATAGTATTAG TGAACGACAA CGAGATAGCC
GACGCCATAT ACCTACTCAT TGAGCGGTCC AGAGTAGTCG CCGAGGGGGC GGGCGCGGCT
TCTGTCGCCG CGCTGTTGAG CGGGAAGATA GACGCCAGGG GAAAGAAGGT GGCGGCCGTG
GTCTCCGGCG GCAACATAGA CGCGCCAATA CTAATGAGGG TGTTAATGAA GTCTCTGGCG
AGGCAGAGGA GGGTTGTGAA GCTCGTCGGA GAGGTCCCCG ACAGGCCGGG CACCTTGGCC
AAGGCCTCGG CAATCTTGGC GGCTCACAAT GTGAACATTC TAGAGGTCTT CCACGAGCGG
TATGACCCAG AGCAGAGGCC AAACTACGTC CGCCTAATCT TTGTGGTAGA GATCCCTGGG
ACTCTCGACA TCGCTAAGCT GTTAGACGAG CTTGAGAAAA ACGGCTTCTT CTTCGAGGCG
TCTCAACGCT AG
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| Protein sequence | MILLEEALEV IRQKQSEGKI HRTPTLRSES LSRIVGGDVY LKLEALQKTG SFKIRGAYFA
MHKYIQEGYR EFITASSGNH AQGVAYAAQL HGVKATVVMP ETTPWLKVKK TQDYGASVVL
YGESYYEAEK RARELVREGV KFLHAYDDYY VISGQATLGA EIVEDVPDVD VVVVPVGGGG
LISGVAYAVK RRRPSVKIIG VQASGAPAAY LSFREGKPVT IEKVDTIADG IAVKRPGDIT
LKLMREYVDD IVLVNDNEIA DAIYLLIERS RVVAEGAGAA SVAALLSGKI DARGKKVAAV
VSGGNIDAPI LMRVLMKSLA RQRRVVKLVG EVPDRPGTLA KASAILAAHN VNILEVFHER
YDPEQRPNYV RLIFVVEIPG TLDIAKLLDE LEKNGFFFEA SQR
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